| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH9_1018 |
|---|
| Symbol | prfC |
|---|
| ID | 5168827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009487 |
|---|
| Strand | + |
|---|
| Start bp | 1073355 |
|---|
| End bp | 1074917 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640565368 |
|---|
| Product | peptide chain release factor 3 |
|---|
| Protein accession | YP_001246395 |
|---|
| Protein GI | 148267452 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG4108] Peptide chain release factor RF-3 |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0165348 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTAA AGCAAGAAGT TGAGTCTAGA AAGACTTTTG CGATTATTTC ACATCCCGAT
GCAGGGAAAA CAACGTTAAC TGAAAAACTA TTGTACTTCA GTGGTGCTAT TCGTGAAGCG
GGTACAGTTA AAGGGAAGAA GACTGGTAAA TTTGCGACAA GTGACTGGAT GAAAGTTGAA
CAAGAGCGTG GTATTTCTGT AACTAGTTCA GTAATGCAAT TTGATTACGA TGATTATAAA
ATCAATATCT TAGATACACC AGGACATGAA GACTTTTCAG AAGATACGTA TAGAACATTA
ATGGCAGTTG ACAGTGCTGT CATGGTCATA GACTGTGCAA AAGGTATTGA ACCACAAACA
TTGAAGTTAT TTAAAGTTTG TAAAATGCGT GGTATTCCAA TCTTTACATT CATTAATAAA
TTAGACCGAG TAGGTAAAGA ACCATTTGAA TTATTAGATG AAATCGAAGA GACATTAAAT
ATTGAAACAT ACCCTATGAA TTGGCCAATT GGTATGGGAC AAAGTTTCTT TGGCATCATT
GATAGAAAGT CTAAAACAAT TGAACCATTT AGAGATGAAG AAAATATATT ACATTTGAAT
GATGATTTTG AGTTGGAAGA AGATCATGCA ATTACAAATG ATAGTGCTTT TGAACAAGCG
ATTGAAGAAT TAATGTTGGT TGAAGAAGCG GGTGAAGCCT TTGATAATGA CGCGCTGTTG
AGTGGAGACT TAACACCTGT ATTTTTCGGT TCAGCTTTAG CTAACTTTGG TGTACAAAAT
TTCTTAAATG CATATGTTGA TTTTGCGCCA ATGCCAAATG CGAGACAAAC AAAAGAAGAC
GTTGAAGTAA GCCCGTTTGA TGATTCATTT TCAGGATTTA TCTTTAAAAT TCAAGCCAAC
ATGGACCCTA AACACCGTGA TAGAATTGCC TTTATGCGTG TCGTTAGTGG TGCATTTGAA
CGTGGTATGG ATGTTACTTT GCAACGTACT AATAAAAAGC AAAAGATCAC ACGTTCAACG
TCATTTATGG CAGACGATAA AGAAACTGTG AATCATGCTG TAGCAGGCGA TATCATTGGA
CTATATGATA CTGGTAATTA TCAAATTGGA GATACTTTAG TTGGTGGAAA ACAAACCTAC
AGTTTCCAAG ATTTACCACA ATTTACGCCA GAAATTTTTA TGAAAGTTTC TGCTAAAAAC
GTCATGAAAC AGAAGCATTT CCATAAAGGT ATTGAACAAT TAGTACAAGA AGGTGCGATT
CAATACTATA AAACATTACA CACAAACCAA ATTATTTTAG GTGCTGTTGG TCAGTTACAA
TTTGAAGTTT TCGAACATAG AATGAAAAAC GAATATAATG TTGATGTTGT TATGGAGCCA
GTAGGCCGTA AAATTGCACG TTGGATTGAA AATGAAGACC AAATTACAGA TAAGATGAAC
ACATCAAGAT CGATTTTAGT GAAAGATAGA TATGACGATT TAGTATTCTT ATTTGAAAAT
GAATTTGCAA CAAGATGGTT TGAAGAGAAA TTCCTTGAAA TTAAATTGTA TAGTTTACTT
TAA
|
|---|
| Protein sequence | MNLKQEVESR KTFAIISHPD AGKTTLTEKL LYFSGAIREA GTVKGKKTGK FATSDWMKVE
QERGISVTSS VMQFDYDDYK INILDTPGHE DFSEDTYRTL MAVDSAVMVI DCAKGIEPQT
LKLFKVCKMR GIPIFTFINK LDRVGKEPFE LLDEIEETLN IETYPMNWPI GMGQSFFGII
DRKSKTIEPF RDEENILHLN DDFELEEDHA ITNDSAFEQA IEELMLVEEA GEAFDNDALL
SGDLTPVFFG SALANFGVQN FLNAYVDFAP MPNARQTKED VEVSPFDDSF SGFIFKIQAN
MDPKHRDRIA FMRVVSGAFE RGMDVTLQRT NKKQKITRST SFMADDKETV NHAVAGDIIG
LYDTGNYQIG DTLVGGKQTY SFQDLPQFTP EIFMKVSAKN VMKQKHFHKG IEQLVQEGAI
QYYKTLHTNQ IILGAVGQLQ FEVFEHRMKN EYNVDVVMEP VGRKIARWIE NEDQITDKMN
TSRSILVKDR YDDLVFLFEN EFATRWFEEK FLEIKLYSLL
|
|---|
| |