| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH9_0634 |
|---|
| Symbol | |
|---|
| ID | 5169563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009487 |
|---|
| Strand | + |
|---|
| Start bp | 702566 |
|---|
| End bp | 703285 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640564985 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_001246014 |
|---|
| Protein GI | 148267071 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.828667 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTGA ATCAAATTAA AGCAGTTGTA TTTGATTTAG AAGGTACGTT GTTGGACAGA
GTTAAATCTC GAGAGAAATT TATCGAAGAG CAATATGAAC GATTTCATGA CTACTTAATT
CATGTTCAAC TGGCAGATTT TAAAAAAGCA TTTATTGAGC TAGATGACGA TGAAGATAAT
GATAAACCTG ATTTATATAA AGAAATCATT AAACGTTTCC ATGTAGATAG GTTAACTTGG
AAAGACTTAT TTAATGATTT TGAAATGCAT TTTTATCGTT ATGTATTTCC TTATTACGAT
ACTTTGTATA CACTAGAAAA GCTATCGCAA AAAGGCTTTC AAATTGGTGT TATCGCAAAT
GGTAAATCTA AGATTAAACA ATTTCGATTA CATTCACTTG GTTTGATGCA TGTTATTAAT
TATTTATCAA CATCAGAAAC AGTTGGTTTT CGTAAACCAC ATCCTAAAAT TTTTGAAGAT
ATGATTGATC AACTAGGGGT ATTACCTGAG CAAATTATGT ATGTTGGCGA TGATGCGTTA
AATGATGTAG CTCCAGCACG AGCTATGGGC ATGGTTAGTG TATGGTATAA ACAAGAAGAT
GCTGAAATTG AACCACTCGA AGAAGAAGTT GATTTTACAA TTACAACAGT GGAAGAATTA
TTAACCATTT TACCAATAAA AAATGATAAT AAAGGAGAAA ATTATGGATC TATTTACTAG
|
|---|
| Protein sequence | MDLNQIKAVV FDLEGTLLDR VKSREKFIEE QYERFHDYLI HVQLADFKKA FIELDDDEDN
DKPDLYKEII KRFHVDRLTW KDLFNDFEMH FYRYVFPYYD TLYTLEKLSQ KGFQIGVIAN
GKSKIKQFRL HSLGLMHVIN YLSTSETVGF RKPHPKIFED MIDQLGVLPE QIMYVGDDAL
NDVAPARAMG MVSVWYKQED AEIEPLEEEV DFTITTVEEL LTILPIKNDN KGENYGSIY
|
|---|
| |