Gene SaurJH9_0566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH9_0566 
Symbol 
ID5169227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH9 
KingdomBacteria 
Replicon accessionNC_009487 
Strand
Start bp623831 
End bp627454 
Gene Length3624 bp 
Protein Length1207 aa 
Translation table11 
GC content36% 
IMG OID640564917 
ProductDNA-directed RNA polymerase subunit beta' 
Protein accessionYP_001245946 
Protein GI148267003 
COG category[K] Transcription 
COG ID[COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit 
TIGRFAM ID[TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.218097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTGATG TAAATAATTT CCATTATATG AAAATAGGAT TGGCTTCACC TGAAAAAATC 
CGTTCTTGGT CTTTTGGTGA AGTTAAAAAA CCTGAAACAA TCAACTACCG TACATTAAAA
CCTGAAAAAG ATGGTCTATT CTGTGAAAGA ATTTTCGGAC CTACAAAAGA CTGGGAATGT
AGTTGTGGTA AATACAAACG TGTTCGCTAC AAAGGCATGG TCTGTGACAG ATGTGGAGTT
GAAGTAACTA AATCTAAAGT ACGTCGTGAA AGAATGGGTC ACATTGAACT TGCTGCTCCA
GTTTCTCACA TTTGGTATTT CAAAGGTATA CCAAGTCGTA TGGGATTATT ACTTGACATG
TCACCAAGAG CATTAGAAGA GGTTATTTAC TTTGCTTCTT ATGTTGTTGT AGATCCAGGT
CCAACTGGTT TAGAAAAGAA AACTTTATTA TCTGAAGCTG AATTCAGAGA TTATTATGAT
AAATACCCAG GTCAATTCGT TGCAAAAATG GGTGCAGAAG GTATTAAAGA TTTACTTGAA
GAGATTGATC TTGACGAAGA ACTTAAATTG TTACGCGATG AGTTGGAATC AGCTACTGGT
CAAAGACTTA CTCGTGCAAT TAAACGTTTA GAAGTTGTTG AATCATTCCG TAATTCAGGT
AACAAACCTT CATGGATGAT TTTAGATGTA CTTCCAATCA TCCCACCAGA AATTCGTCCA
ATGGTTCAAT TAGATGGTGG ACGATTTGCA ACAAGTGACT TAAACGACTT ATACCGTCGT
GTAATTAATC GAAATAATCG TTTGAAACGT TTATTAGATT TAGGTGCACC TGGTATCATC
GTTCAAAACG AAAAACGTAT GTTACAAGAA GCCGTTGACG CTTTAATTGA TAATGGTCGT
CGTGGTCGTC CAGTTACTGG CCCAGGTAAC CGTCCATTAA AATCTTTATC TCATATGTTA
AAAGGTAAAC AAGGTCGTTT CCGTCAAAAC TTACTTGGTA AACGTGTCGA CTATTCAGGA
CGTTCAGTTA TTGCAGTAGG TCCAAGCTTG AAAATGTACC AATGTGGTTT ACCAAAAGAA
ATGGCACTTG AACTATTTAA ACCATTCGTA ATGAAAGAAT TAGTTCAACG TGAAATTGCA
ACTAACATTA AAAATGCGAA GAGTAAAATC GAACGTATGG ATGATGAAGT TTGGGACGTA
TTGGAAGAAG TAATTAGAGA ACATCCTGTA TTACTTAACC GTGCACCAAC ACTTCATAGA
CTTGGTATTC AAGCATTTGA ACCAACTTTA GTTGAAGGTC GTGCGATTCG TCTACATCCA
CTTGTAACAA CAGCTTATAA TGCTGACTTT GACGGTGACC AAATGGCGGT TCACGTTCCT
TTATCAAAAG AGGCACAAGC TGAAGCAAGA ATGTTGATGT TAGCAGCACA AAACATCTTG
AACCCTAAAG ATGGTAAACC TGTAGTTACA CCATCACAAG ATATGGTACT TGGTAACTAT
TACCTTACTT TAGAAAGAAA AGATGCAGTA AATACAGGCG CAATCTTTAA TAATACAAAT
GAAGTATTAA AAGCATATGC AAATGGCTTT GTACATTTAC ACACTAGAAT TGGTGTACAT
GCAAGTTCGT TCAATAATCC AACATTTACT GAAGAACAAA ACAAAAAGAT TCTTGCTACG
TCAGTAGGTA AAATTATATT CAATGAAATC ATTCCAGATT CATTTGCTTA TATTAATGAA
CCTACGCAAG AAAACTTAGA AAGAAAGACA CCAAACAGAT ATTTCATCGA TCCTACAACT
TTAGGTGAAG GTGGATTAAA AGAATACTTT GAAAATGAAG AATTAATTGA ACCTTTCAAC
AAAAAATTCT TAGGTAATAT TATTGCAGAA GTATTCAACA GATTTAGCAT CACTGATACA
TCAATGATGT TAGACCGTAT GAAAGACTTA GGATTCAAAT TCTCATCTAA AGCTGGTATT
ACAGTAGGTG TTGCTGATAT CGTAGTATTA CCTGATAAGC AACAAATACT TGATGAGCAT
GAAAAATTAG TCGACAGAAT TACAAAACAA TTCAACCGTG GTTTAATCAC TGAAGAAGAA
AGATATAATG CAGTTGTTGA AATTTGGACA GATGCAAAAG ATCAAATTCA AGGTGAATTG
ATGCAATCAC TTGATAAAAC TAACCCAATC TTCATGATGA GTGATTCAGG TGCCCGTGGT
AACGCATCTA ACTTTACACA GTTAGCAGGT ATGCGTGGAT TGATGGCCGC ACCATCTGGT
AAGATTATCG AATTACCAAT CACATCTTCA TTCCGTGAAG GTTTAACAGT ACTTGAATAC
TTCATCTCAA CTCACGGTGC ACGTAAAGGT CTTGCCGATA CAGCACTTAA AACAGCTGAC
TCAGGATATC TTACTCGTCG TCTTGTTGAC GTGGCACAAG ATGTTATTGT TCGTGAAGAA
GACTGTGGTA CTGATAGAGG TTTATTAGTT TCTGATATTA AAGAAGGTAC AGAAATGATT
GAACCATTTA TCGAACGTAT TGAAGGTCGT TATTCTAAAA AAACAATTCG TCATCCTGAA
ACTGATGAAA TAATCATTCG TCCTGATGAA TTAATTACAC CTGAAATTGC TAAGAAAATT
ACAGATGCTG GTATTGAACA AATGTATATT CGCTCAGCAT TTACTTGTAA CGCACGACAT
GGTGTTTGTG AAAAATGTTA CGGTAAAAAC CTTGCTACTG GTGAAAAAGT TGAAGTTGGT
GAAGCAGTTG GTACAATTGC AGCCCAATCT ATCGGTGAAC CAGGTACACA GCTTACAATG
CGTACATTCC ATACAGGTGG GGTAGCAGGT AGCGATATCA CACAAGGTCT TCCTCGTATT
CAAGAGATTT TCGAAGCACG TAACCCTAAA GGTCAAGCGG TAATTACGGA AATCGAAGGT
GTCGTAGAAG ATATTAAATT AGCAAAAGAT AGACAACAAG AAATTGTTGT TAAAGGTGCT
AATGAAACAA GATCATACCT TGCTTCAGGT ACTTCAAGAA TTATTGTAGA AATCGGTCAA
CCAGTTCAAC GTGGTGAAGT ATTAACTGAA GGTTCTATTG AACCTAAGAA TTACTTATCT
GTTGCTGGAT TAAACGCGAC TGAAAGCTAC TTATTAAAAG AAGTACAAAA AGTTTACCGT
ATGCAAGGTG TAGAAATCGA CGATAAACAC GTTGAGGTTA TGGTTCGACA AATGTTACGT
AAAGTTAGAA TTATCGAAGC AGGTGATACG AAGTTATTAC CAGGTTCATT AGTTGATATT
CATAACTTTA CAGATGCAAA TAGAGAAGCA TTTAAACACC GTAAGCGTCC TGCAACAGCT
AAACCAGTAT TACTTGGTAT TACTAAAGCA TCACTTGAAA CAGAAAGTTT CTTATCTGCA
GCATCATTCC AAGAAACAAC AAGAGTTCTT ACAGATGCAG CAATTAAAGG TAAGCGTGAT
GACTTATTAG GTCTTAAAGA AAACGTAATT ATTGGTAAGT TAATTCCAGC TGGTACTGGT
ATGAGACGTT ATAGCGACGT AAAATACGAA AAAACAGCTA AACCAGTTGC AGAAGTTGAA
TCTCAAACTG AAGTAACGGA ATAA
 
Protein sequence
MIDVNNFHYM KIGLASPEKI RSWSFGEVKK PETINYRTLK PEKDGLFCER IFGPTKDWEC 
SCGKYKRVRY KGMVCDRCGV EVTKSKVRRE RMGHIELAAP VSHIWYFKGI PSRMGLLLDM
SPRALEEVIY FASYVVVDPG PTGLEKKTLL SEAEFRDYYD KYPGQFVAKM GAEGIKDLLE
EIDLDEELKL LRDELESATG QRLTRAIKRL EVVESFRNSG NKPSWMILDV LPIIPPEIRP
MVQLDGGRFA TSDLNDLYRR VINRNNRLKR LLDLGAPGII VQNEKRMLQE AVDALIDNGR
RGRPVTGPGN RPLKSLSHML KGKQGRFRQN LLGKRVDYSG RSVIAVGPSL KMYQCGLPKE
MALELFKPFV MKELVQREIA TNIKNAKSKI ERMDDEVWDV LEEVIREHPV LLNRAPTLHR
LGIQAFEPTL VEGRAIRLHP LVTTAYNADF DGDQMAVHVP LSKEAQAEAR MLMLAAQNIL
NPKDGKPVVT PSQDMVLGNY YLTLERKDAV NTGAIFNNTN EVLKAYANGF VHLHTRIGVH
ASSFNNPTFT EEQNKKILAT SVGKIIFNEI IPDSFAYINE PTQENLERKT PNRYFIDPTT
LGEGGLKEYF ENEELIEPFN KKFLGNIIAE VFNRFSITDT SMMLDRMKDL GFKFSSKAGI
TVGVADIVVL PDKQQILDEH EKLVDRITKQ FNRGLITEEE RYNAVVEIWT DAKDQIQGEL
MQSLDKTNPI FMMSDSGARG NASNFTQLAG MRGLMAAPSG KIIELPITSS FREGLTVLEY
FISTHGARKG LADTALKTAD SGYLTRRLVD VAQDVIVREE DCGTDRGLLV SDIKEGTEMI
EPFIERIEGR YSKKTIRHPE TDEIIIRPDE LITPEIAKKI TDAGIEQMYI RSAFTCNARH
GVCEKCYGKN LATGEKVEVG EAVGTIAAQS IGEPGTQLTM RTFHTGGVAG SDITQGLPRI
QEIFEARNPK GQAVITEIEG VVEDIKLAKD RQQEIVVKGA NETRSYLASG TSRIIVEIGQ
PVQRGEVLTE GSIEPKNYLS VAGLNATESY LLKEVQKVYR MQGVEIDDKH VEVMVRQMLR
KVRIIEAGDT KLLPGSLVDI HNFTDANREA FKHRKRPATA KPVLLGITKA SLETESFLSA
ASFQETTRVL TDAAIKGKRD DLLGLKENVI IGKLIPAGTG MRRYSDVKYE KTAKPVAEVE
SQTEVTE