Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH9_0566 |
Symbol | |
ID | 5169227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH9 |
Kingdom | Bacteria |
Replicon accession | NC_009487 |
Strand | + |
Start bp | 623831 |
End bp | 627454 |
Gene Length | 3624 bp |
Protein Length | 1207 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640564917 |
Product | DNA-directed RNA polymerase subunit beta' |
Protein accession | YP_001245946 |
Protein GI | 148267003 |
COG category | [K] Transcription |
COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.218097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTGATG TAAATAATTT CCATTATATG AAAATAGGAT TGGCTTCACC TGAAAAAATC CGTTCTTGGT CTTTTGGTGA AGTTAAAAAA CCTGAAACAA TCAACTACCG TACATTAAAA CCTGAAAAAG ATGGTCTATT CTGTGAAAGA ATTTTCGGAC CTACAAAAGA CTGGGAATGT AGTTGTGGTA AATACAAACG TGTTCGCTAC AAAGGCATGG TCTGTGACAG ATGTGGAGTT GAAGTAACTA AATCTAAAGT ACGTCGTGAA AGAATGGGTC ACATTGAACT TGCTGCTCCA GTTTCTCACA TTTGGTATTT CAAAGGTATA CCAAGTCGTA TGGGATTATT ACTTGACATG TCACCAAGAG CATTAGAAGA GGTTATTTAC TTTGCTTCTT ATGTTGTTGT AGATCCAGGT CCAACTGGTT TAGAAAAGAA AACTTTATTA TCTGAAGCTG AATTCAGAGA TTATTATGAT AAATACCCAG GTCAATTCGT TGCAAAAATG GGTGCAGAAG GTATTAAAGA TTTACTTGAA GAGATTGATC TTGACGAAGA ACTTAAATTG TTACGCGATG AGTTGGAATC AGCTACTGGT CAAAGACTTA CTCGTGCAAT TAAACGTTTA GAAGTTGTTG AATCATTCCG TAATTCAGGT AACAAACCTT CATGGATGAT TTTAGATGTA CTTCCAATCA TCCCACCAGA AATTCGTCCA ATGGTTCAAT TAGATGGTGG ACGATTTGCA ACAAGTGACT TAAACGACTT ATACCGTCGT GTAATTAATC GAAATAATCG TTTGAAACGT TTATTAGATT TAGGTGCACC TGGTATCATC GTTCAAAACG AAAAACGTAT GTTACAAGAA GCCGTTGACG CTTTAATTGA TAATGGTCGT CGTGGTCGTC CAGTTACTGG CCCAGGTAAC CGTCCATTAA AATCTTTATC TCATATGTTA AAAGGTAAAC AAGGTCGTTT CCGTCAAAAC TTACTTGGTA AACGTGTCGA CTATTCAGGA CGTTCAGTTA TTGCAGTAGG TCCAAGCTTG AAAATGTACC AATGTGGTTT ACCAAAAGAA ATGGCACTTG AACTATTTAA ACCATTCGTA ATGAAAGAAT TAGTTCAACG TGAAATTGCA ACTAACATTA AAAATGCGAA GAGTAAAATC GAACGTATGG ATGATGAAGT TTGGGACGTA TTGGAAGAAG TAATTAGAGA ACATCCTGTA TTACTTAACC GTGCACCAAC ACTTCATAGA CTTGGTATTC AAGCATTTGA ACCAACTTTA GTTGAAGGTC GTGCGATTCG TCTACATCCA CTTGTAACAA CAGCTTATAA TGCTGACTTT GACGGTGACC AAATGGCGGT TCACGTTCCT TTATCAAAAG AGGCACAAGC TGAAGCAAGA ATGTTGATGT TAGCAGCACA AAACATCTTG AACCCTAAAG ATGGTAAACC TGTAGTTACA CCATCACAAG ATATGGTACT TGGTAACTAT TACCTTACTT TAGAAAGAAA AGATGCAGTA AATACAGGCG CAATCTTTAA TAATACAAAT GAAGTATTAA AAGCATATGC AAATGGCTTT GTACATTTAC ACACTAGAAT TGGTGTACAT GCAAGTTCGT TCAATAATCC AACATTTACT GAAGAACAAA ACAAAAAGAT TCTTGCTACG TCAGTAGGTA AAATTATATT CAATGAAATC ATTCCAGATT CATTTGCTTA TATTAATGAA CCTACGCAAG AAAACTTAGA AAGAAAGACA CCAAACAGAT ATTTCATCGA TCCTACAACT TTAGGTGAAG GTGGATTAAA AGAATACTTT GAAAATGAAG AATTAATTGA ACCTTTCAAC AAAAAATTCT TAGGTAATAT TATTGCAGAA GTATTCAACA GATTTAGCAT CACTGATACA TCAATGATGT TAGACCGTAT GAAAGACTTA GGATTCAAAT TCTCATCTAA AGCTGGTATT ACAGTAGGTG TTGCTGATAT CGTAGTATTA CCTGATAAGC AACAAATACT TGATGAGCAT GAAAAATTAG TCGACAGAAT TACAAAACAA TTCAACCGTG GTTTAATCAC TGAAGAAGAA AGATATAATG CAGTTGTTGA AATTTGGACA GATGCAAAAG ATCAAATTCA AGGTGAATTG ATGCAATCAC TTGATAAAAC TAACCCAATC TTCATGATGA GTGATTCAGG TGCCCGTGGT AACGCATCTA ACTTTACACA GTTAGCAGGT ATGCGTGGAT TGATGGCCGC ACCATCTGGT AAGATTATCG AATTACCAAT CACATCTTCA TTCCGTGAAG GTTTAACAGT ACTTGAATAC TTCATCTCAA CTCACGGTGC ACGTAAAGGT CTTGCCGATA CAGCACTTAA AACAGCTGAC TCAGGATATC TTACTCGTCG TCTTGTTGAC GTGGCACAAG ATGTTATTGT TCGTGAAGAA GACTGTGGTA CTGATAGAGG TTTATTAGTT TCTGATATTA AAGAAGGTAC AGAAATGATT GAACCATTTA TCGAACGTAT TGAAGGTCGT TATTCTAAAA AAACAATTCG TCATCCTGAA ACTGATGAAA TAATCATTCG TCCTGATGAA TTAATTACAC CTGAAATTGC TAAGAAAATT ACAGATGCTG GTATTGAACA AATGTATATT CGCTCAGCAT TTACTTGTAA CGCACGACAT GGTGTTTGTG AAAAATGTTA CGGTAAAAAC CTTGCTACTG GTGAAAAAGT TGAAGTTGGT GAAGCAGTTG GTACAATTGC AGCCCAATCT ATCGGTGAAC CAGGTACACA GCTTACAATG CGTACATTCC ATACAGGTGG GGTAGCAGGT AGCGATATCA CACAAGGTCT TCCTCGTATT CAAGAGATTT TCGAAGCACG TAACCCTAAA GGTCAAGCGG TAATTACGGA AATCGAAGGT GTCGTAGAAG ATATTAAATT AGCAAAAGAT AGACAACAAG AAATTGTTGT TAAAGGTGCT AATGAAACAA GATCATACCT TGCTTCAGGT ACTTCAAGAA TTATTGTAGA AATCGGTCAA CCAGTTCAAC GTGGTGAAGT ATTAACTGAA GGTTCTATTG AACCTAAGAA TTACTTATCT GTTGCTGGAT TAAACGCGAC TGAAAGCTAC TTATTAAAAG AAGTACAAAA AGTTTACCGT ATGCAAGGTG TAGAAATCGA CGATAAACAC GTTGAGGTTA TGGTTCGACA AATGTTACGT AAAGTTAGAA TTATCGAAGC AGGTGATACG AAGTTATTAC CAGGTTCATT AGTTGATATT CATAACTTTA CAGATGCAAA TAGAGAAGCA TTTAAACACC GTAAGCGTCC TGCAACAGCT AAACCAGTAT TACTTGGTAT TACTAAAGCA TCACTTGAAA CAGAAAGTTT CTTATCTGCA GCATCATTCC AAGAAACAAC AAGAGTTCTT ACAGATGCAG CAATTAAAGG TAAGCGTGAT GACTTATTAG GTCTTAAAGA AAACGTAATT ATTGGTAAGT TAATTCCAGC TGGTACTGGT ATGAGACGTT ATAGCGACGT AAAATACGAA AAAACAGCTA AACCAGTTGC AGAAGTTGAA TCTCAAACTG AAGTAACGGA ATAA
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Protein sequence | MIDVNNFHYM KIGLASPEKI RSWSFGEVKK PETINYRTLK PEKDGLFCER IFGPTKDWEC SCGKYKRVRY KGMVCDRCGV EVTKSKVRRE RMGHIELAAP VSHIWYFKGI PSRMGLLLDM SPRALEEVIY FASYVVVDPG PTGLEKKTLL SEAEFRDYYD KYPGQFVAKM GAEGIKDLLE EIDLDEELKL LRDELESATG QRLTRAIKRL EVVESFRNSG NKPSWMILDV LPIIPPEIRP MVQLDGGRFA TSDLNDLYRR VINRNNRLKR LLDLGAPGII VQNEKRMLQE AVDALIDNGR RGRPVTGPGN RPLKSLSHML KGKQGRFRQN LLGKRVDYSG RSVIAVGPSL KMYQCGLPKE MALELFKPFV MKELVQREIA TNIKNAKSKI ERMDDEVWDV LEEVIREHPV LLNRAPTLHR LGIQAFEPTL VEGRAIRLHP LVTTAYNADF DGDQMAVHVP LSKEAQAEAR MLMLAAQNIL NPKDGKPVVT PSQDMVLGNY YLTLERKDAV NTGAIFNNTN EVLKAYANGF VHLHTRIGVH ASSFNNPTFT EEQNKKILAT SVGKIIFNEI IPDSFAYINE PTQENLERKT PNRYFIDPTT LGEGGLKEYF ENEELIEPFN KKFLGNIIAE VFNRFSITDT SMMLDRMKDL GFKFSSKAGI TVGVADIVVL PDKQQILDEH EKLVDRITKQ FNRGLITEEE RYNAVVEIWT DAKDQIQGEL MQSLDKTNPI FMMSDSGARG NASNFTQLAG MRGLMAAPSG KIIELPITSS FREGLTVLEY FISTHGARKG LADTALKTAD SGYLTRRLVD VAQDVIVREE DCGTDRGLLV SDIKEGTEMI EPFIERIEGR YSKKTIRHPE TDEIIIRPDE LITPEIAKKI TDAGIEQMYI RSAFTCNARH GVCEKCYGKN LATGEKVEVG EAVGTIAAQS IGEPGTQLTM RTFHTGGVAG SDITQGLPRI QEIFEARNPK GQAVITEIEG VVEDIKLAKD RQQEIVVKGA NETRSYLASG TSRIIVEIGQ PVQRGEVLTE GSIEPKNYLS VAGLNATESY LLKEVQKVYR MQGVEIDDKH VEVMVRQMLR KVRIIEAGDT KLLPGSLVDI HNFTDANREA FKHRKRPATA KPVLLGITKA SLETESFLSA ASFQETTRVL TDAAIKGKRD DLLGLKENVI IGKLIPAGTG MRRYSDVKYE KTAKPVAEVE SQTEVTE
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