Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH9_0183 |
Symbol | |
ID | 5167477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH9 |
Kingdom | Bacteria |
Replicon accession | NC_009487 |
Strand | + |
Start bp | 220979 |
End bp | 221659 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640564513 |
Product | ABC transporter related |
Protein accession | YP_001245566 |
Protein GI | 148266623 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.337585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGAAT TAAAGAATGT TTATAGGACT TTTAAAAACG GTGATAAAAA TATTCGAGTT TTAAAAGACA TTAATATACA TATCAATGCA GGTGAATTCA TAGCGATTAT GGGACCATCA GGCTCAGGGA AGAGCACACT GATTAATATC TTAGGATTTA TAGATCGAGA GTATCATGGT GAATATTTGT TTGAAGGAAG TAATTATCAG ACACAATCTG ATAATCAATT GGCAAACATA AGAAATAAAA CAGTTGGATT TGTTTTTCAA AATTTTAAAC TAATTCATAA TAATACTATT TTAGAAAATA TAAGTATGCC ACTGGTATAT ACAAATATGA ATACGATAGA ACGAAAGAAT AAAGTTATGA CTGTGCTCAG TGCTGTAGGC CTAGATGGCA AAGGTGATTT TACTCCTAGT AAACTATCAG GCGGTCAACA ACAACGTGTT GCAATTGCGC GAGCCATTAT AAATAATCCA AAGTTTATTA TTGCAGATGA GCCAACGGGT GCTTTGGATT CAGATACATC TAAAATTATT ATGGACATAT TTACATCATT AAACCGAGAT AATCATACTA CAATTATTTT AGTCACACAT GATCGTAAAG TAGCAGAAAA AGCTGATCGA ATAATTCATA TTTTGGATGG TCGTATACAA CATGAAGAGG TGATTAAATG A
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Protein sequence | MIELKNVYRT FKNGDKNIRV LKDINIHINA GEFIAIMGPS GSGKSTLINI LGFIDREYHG EYLFEGSNYQ TQSDNQLANI RNKTVGFVFQ NFKLIHNNTI LENISMPLVY TNMNTIERKN KVMTVLSAVG LDGKGDFTPS KLSGGQQQRV AIARAIINNP KFIIADEPTG ALDSDTSKII MDIFTSLNRD NHTTIILVTH DRKVAEKADR IIHILDGRIQ HEEVIK
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