Gene SaurJH9_0139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH9_0139 
Symbol 
ID5168758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH9 
KingdomBacteria 
Replicon accessionNC_009487 
Strand+ 
Start bp165222 
End bp166250 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content34% 
IMG OID640564469 
Productpolysaccharide biosynthesis protein CapD 
Protein accessionYP_001245522 
Protein GI148266579 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1086] Predicted nucleoside-diphosphate sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGATG ACAAAATTTT ATTAATTACT GGGGGCACAG GATCATTCGG TAATGCTGTT 
ATGAAACGGT TTTTAGATTC TAATATTAAA GAAATTCGTA TTTTTTCACG CGATGAGAAA 
AAACAAGATG ACATTCGAAA AAAATATAAT AATTCAAAAT TAAAGTTCTA CATTGGTGAT 
GTGCGTGATA GTCAAAGTGT AGAAACAGCA ATGCGAGATG TTGATTACGT ATTCCATGCA 
GCAGCTTTAA AACAAGTGCC GTCATGTGAA TTCTTTCCAG TTGAGGCAGT GAAGACAAAT 
ATTATTGGTA CAGAAAATGT CTTACAAAGT GCTATTCATC AAAATGTTAA AAAAGTCATA 
TGTTTATCTA CAGATAAGGC AGCGTATCCT ATTAATGCTA TGGGTATTTC AAAAGCAATG 
ATGGAAAAAG TATTCGTAGC CAAATCAAGA AATATTCGTA GTGAACAAAC GCTTATTTGT 
GGTACAAGAT ACGGTAATGT GATGGCTTCA AGAGGATCAG TAATACCTTT GTTTATCGAC 
AAAATCAAAG CTGGAGAACC TTTAACGATT ACAGATCCTG ATATGACAAG ATTTTTAATG 
AGCTTAGAAG ATGCGGTAGA ACTAGTTGTT CATGCATTTA AGCATGCAGA GACAGGAGAT 
ATTATGGTTC AAAAAGCACC AAGCTCAACG GTAGGGGATC TTGCGACCGC ATTATTAGAA 
TTGTTTGAAG CTGATAATGC AATTGAAATC ATTGGTACGC GACATGGAGA GAAAAAAGCA 
GAAACATTGT TGACGAGAGA AGAATACGCA CAATGTGAAG ATATGGGTGA TTATTTTAGA 
GTGCCGGCAG ACTCCAGAGA TTTAAATTAT AGTAATTATG TTGAAACCGG TAACGAAAAG 
ATTACGCAAT CTTATGAATA TAACTCCGAT AATACACATA TTTTAACGGT GGAAGAGATA 
AAAGAAAAAC TTTTAACACT AGAATATGTT AGAAACGAAT TGAATGATTA TAAAGCTTCA 
ATGAGATAG
 
Protein sequence
MFDDKILLIT GGTGSFGNAV MKRFLDSNIK EIRIFSRDEK KQDDIRKKYN NSKLKFYIGD 
VRDSQSVETA MRDVDYVFHA AALKQVPSCE FFPVEAVKTN IIGTENVLQS AIHQNVKKVI 
CLSTDKAAYP INAMGISKAM MEKVFVAKSR NIRSEQTLIC GTRYGNVMAS RGSVIPLFID 
KIKAGEPLTI TDPDMTRFLM SLEDAVELVV HAFKHAETGD IMVQKAPSST VGDLATALLE 
LFEADNAIEI IGTRHGEKKA ETLLTREEYA QCEDMGDYFR VPADSRDLNY SNYVETGNEK 
ITQSYEYNSD NTHILTVEEI KEKLLTLEYV RNELNDYKAS MR