Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH9_0014 |
Symbol | |
ID | 5169923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH9 |
Kingdom | Bacteria |
Replicon accession | NC_009487 |
Strand | + |
Start bp | 18383 |
End bp | 20350 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640564349 |
Product | hypothetical protein |
Protein accession | YP_001245404 |
Protein GI | 148266461 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3887] Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGGC AGTCCACTAA GAAAGCTTTA CTAATACCAT TTGTCATCAT GATCATCACA GCAATTGTTT TAATGGGTGT ATGGTTTATC TTTAATAGTC TTATAGCATT AATTGCATCT ATCGTTCTTG TCGTGATGAT TATTGTTAGC ATCATTTTAT TCAGACAAGC TTTAATGAAA ATGGATAGTT ATGTAGATGG TTTGAGTGCT CAAATTTCAA CAACAAATAA TAAAGCAATC AAACATTTAC CAATTGGTAT CATTGTTTTA GATGAAAATG ATCACATCGA ATGGGTTAAC CAATTTATGA CAAATCATAT GGAAGCAAAT GTCATTTCTG AATCTGTAAA TGAAGTATTT CCAAACATTT TAAAGCAATT AGATAGAGTG AAATCCGTTG AAATAGAATA TAATCAGTAT CATTTCCAAG TACGTTATTC TGAGAATGAT CATTGCCTCT ATTTCTTTGA TATAACTGAA CAAGTACAAA CAAATGAACT ATATGAAAAT TCTAAACCAA TCATTGCGAC ATTATTTTTA GATAACTACG ATGAGATTAC TCAAAATATG AATGATACGC AGCGTTCGGA AATCAATTCA ATGGTAACGC GTGTTATTAG TCGATGGGCA ACTGAGTATA ATATATTCTT TAAAAGGTAT AGTTCCGATC AATTCGTAGC CTATTTAAAT CAAAAAATAT TAGCTGACTT AGAAGAATCT AAATTTGATA TCTTGAGTCA ATTACGTGAA AAAAGTGTTG GTTATCGTGC CCAATTAACA TTAAGTATTG GTGTTGGTGA AGGTACTGAA AATTTAATCG ATTTAGGTGA ATTATCACAA TCAGGCCTAG ACTTAGCATT AGGGCGCGGT GGCGACCAAG TTGCAATTAA AAGTATTAAT GGTAATGTGC GTTTCTATGG CGGTAAGACT GACCCGATGG AGAAACGTAC TCGTGTAAGA GCACGAGTGA TCTCACATGC GTTAAAAGAT ATCCTTGCAG AGGGTGACAA AGTCATTATC ATGGGACATA AACGTCCTGA CTTAGATGCA ATTGGTGCAG CAATCGGTGT GTCTAGATTT GCAATGATGA ATAATTTAGA AGCATACATC GTATTAAATG AGACTGACAT TGATCCAACA TTACGACGCG TGATGAACGA AATTGATAAA AAGTCAGAGT TAAGAGAGCG ATTTATAACA TCAGATGATG CTTGGGATAT GATGACATCT AAGACAACCG TAGTGATTGT TGATACGCAT AAACCGGAAC TGGTTTTAGA TGAAAATGTC TTAAATAAAG CAAACCGTAA AGTTGTTATC GATCATCATA GACGTGGTGA AAGCTTCATC TCTAATCCAT TGTTGATATA TATGGAACCA TACGCAAGTT CAACAGCTGA ATTGGTAACA GAGTTACTGG AATATCAACC AACAGAACAA CGTTTAACAC GTCTTGAATC AACAGTGATG TATGCAGGTA TTATTGTAGA TACAAGAAAC TTTACATTAC GAACAGGATC AAGAACATTC GATGCAGCGA GTTATTTACG TGCACATGGT GCAGATACGA TTTTAACGCA ACATTTCTTA AAAGATGATG TGGATACTTA CATTAATCGA TCTGAATTAA TTCGAACTGT AAAAGTTGAA GATAATGGCA TAGCCATTGC GCATGGTTCA GACGATAAAA TTTATCATCC AGTAACAGTT GCACAAGCAG CAGATGAACT GTTAAGTTTA GAAGGTATTG AAGCATCATA TGTTGTTGCG AGACGTGAAG ATAATCTGAT TGGTATATCT GCGCGTTCAC TCGGTTCAGT AAATGTTCAG TTAACAATGG AAGCACTTGG TGGCGGTGGA CATTTAACCA ATGCTGCAAC ACAACTTAAA GGTGTGACAG TCGAAGAGGC GATAGCACAA TTACAACAAG CAATTACAGA ACAATTAAGT AGGAGTGAAG ATGCATGA
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Protein sequence | MNRQSTKKAL LIPFVIMIIT AIVLMGVWFI FNSLIALIAS IVLVVMIIVS IILFRQALMK MDSYVDGLSA QISTTNNKAI KHLPIGIIVL DENDHIEWVN QFMTNHMEAN VISESVNEVF PNILKQLDRV KSVEIEYNQY HFQVRYSEND HCLYFFDITE QVQTNELYEN SKPIIATLFL DNYDEITQNM NDTQRSEINS MVTRVISRWA TEYNIFFKRY SSDQFVAYLN QKILADLEES KFDILSQLRE KSVGYRAQLT LSIGVGEGTE NLIDLGELSQ SGLDLALGRG GDQVAIKSIN GNVRFYGGKT DPMEKRTRVR ARVISHALKD ILAEGDKVII MGHKRPDLDA IGAAIGVSRF AMMNNLEAYI VLNETDIDPT LRRVMNEIDK KSELRERFIT SDDAWDMMTS KTTVVIVDTH KPELVLDENV LNKANRKVVI DHHRRGESFI SNPLLIYMEP YASSTAELVT ELLEYQPTEQ RLTRLESTVM YAGIIVDTRN FTLRTGSRTF DAASYLRAHG ADTILTQHFL KDDVDTYINR SELIRTVKVE DNGIAIAHGS DDKIYHPVTV AQAADELLSL EGIEASYVVA RREDNLIGIS ARSLGSVNVQ LTMEALGGGG HLTNAATQLK GVTVEEAIAQ LQQAITEQLS RSEDA
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