| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH9_0008 |
|---|
| Symbol | |
|---|
| ID | 5169060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009487 |
|---|
| Strand | + |
|---|
| Start bp | 10955 |
|---|
| End bp | 12469 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640564343 |
|---|
| Product | histidine ammonia-lyase |
|---|
| Protein accession | YP_001245398 |
|---|
| Protein GI | 148266455 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2986] Histidine ammonia-lyase |
|---|
| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTAT ATTTAGATGG TGAAACACTA ACAATTGAGG ATATTAAATC ATTTTTACAA
CAACAATCAA AGATTGAAAT TATTGATGAT GCGTTAGAAC GTGTCAAAAA AAGTAGAGCG
GTAGTTGAAC GTATTATTGA AAATGAGGAA ACGGTTTACG GTATCACTAC AGGTTTTGGG
TTATTTAGTG ATGTACGTAT AGACCCGACG CAATATAATG AATTACAAGT GAATCTGATA
CGCTCACATG CCTGTGGACT AGGTGAGCCA TTTTCAAAAG AAGTAGCATT AGTCATGATG
ATTTTACGAT TGAATACATT ATTAAAAGGT CATTCAGGTG CCACTTTAGA ATTAGTGAGA
CAATTACAAT TTTTTATAAA TGAACGTATT ATACCGATAA TCCCACAACA AGGCTCTCTC
GGTGCATCAG GAGATTTAGC GCCATTATCA CATTTAGCAT TAGCATTAAT TGGTGAAGGG
AAAGTATTGT ACAGAGGGGA AGAAAAGGAT AGTGACGATG TATTAAGAGA ATTAAATAGA
CAACCTTTGA ACCTTCAGGC TAAAGAGGGT TTAGCATTGA TTAATGGTAC GCAAGCTATG
ACAGCTCAAG GTGTCATTAG TTATATAGAA GCAGAAGATT TAGGTTACCA ATCTGAATGG
ATTGCTGCAT TAACGCATCA GTCTCTTAAT GGCATTATAG ATGCATATCG ACATGATGTG
CACTCTGTTC GTAATTTTCA AGAACAGATT AATGTGGCAG CGCGTATGCG TGATTGGTTA
GAAGGATCAA CATTAACGAC GCGACAAGCA GAAATACGTG TACAAGATGC ATATACGTTG
CGTTGTATAC CACAAATCCA TGGCGCGAGT TTTCAAGTAT TCAATTATGT TAAACAGCAA
TTAGAATTTG AAATGAATGC GGCTAATGAT AATCCACTTA TATTTGAGGA AGCAAATGAA
ACGTTTGTTA TTTCAGGTGG TAACTTCCAT GGACAACCTA TTGCTTTTGC ATTAGATCAT
CTTAAATTAG GTGTAAGTGA ATTAGCAAAC GTATCGGAAC GTCGTCTAGA GCGACTAGTA
AATCCTCAAT TAAATGGTGA TTTACCAGCA TTTCTTAGTC CAGAGCCAGG ATTGCAAAGT
GGCGCGATGA TTATGCAATA TGCTGCTGCA AGTCTCGTTT CTGAAAATAA AACTTTAGCG
CATCCAGCGA GTGTTGATTC TATCACTTCA TCTGCGAACC AAGAAGATCA CGTATCTATG
GGAACTACAG CTGCTAGACA TGGTTATCAA ATTATTGAAA ATGCAAGACG TGTGTTGGCA
ATCGAATGTG TTATTGCATT ACAAGCAGCA GAGTTGAAAG GTGTCGAAGG ATTATCACCA
AAAACACGTC GTAAATATGA GGAGTTTCGA AGTATCGTGC CATCCATTAC ACATGACCGT
CAATTTCATA AAGATATTGA AGCGGTTGCA CAGTATTTAA AGCAATCAAT TTATCAAACG
ACTGCATGTC ACTAA
|
|---|
| Protein sequence | MTLYLDGETL TIEDIKSFLQ QQSKIEIIDD ALERVKKSRA VVERIIENEE TVYGITTGFG
LFSDVRIDPT QYNELQVNLI RSHACGLGEP FSKEVALVMM ILRLNTLLKG HSGATLELVR
QLQFFINERI IPIIPQQGSL GASGDLAPLS HLALALIGEG KVLYRGEEKD SDDVLRELNR
QPLNLQAKEG LALINGTQAM TAQGVISYIE AEDLGYQSEW IAALTHQSLN GIIDAYRHDV
HSVRNFQEQI NVAARMRDWL EGSTLTTRQA EIRVQDAYTL RCIPQIHGAS FQVFNYVKQQ
LEFEMNAAND NPLIFEEANE TFVISGGNFH GQPIAFALDH LKLGVSELAN VSERRLERLV
NPQLNGDLPA FLSPEPGLQS GAMIMQYAAA SLVSENKTLA HPASVDSITS SANQEDHVSM
GTTAARHGYQ IIENARRVLA IECVIALQAA ELKGVEGLSP KTRRKYEEFR SIVPSITHDR
QFHKDIEAVA QYLKQSIYQT TACH
|
|---|
| |