Gene Tpet_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1813 
Symbol 
ID5170568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1821563 
End bp1822756 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content48% 
IMG OID640564334 
Producthypothetical protein 
Protein accessionYP_001245389 
Protein GI148270929 
COG category[S] Function unknown 
COG ID[COG3864] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGTG AGGAAATTCT CAAAAAGGCT TTGCTGAACA TAGGAAAGGA ATCACCGTTC 
TATTATTACG TTCTTCTCGG TGTCAAGCTG GTACCATCGA AAAACACGAG GAATCTGAAG
CTCTCTTTTT CCACAACCGG AGATGTGATG TTGTTGTACA ATCCAGAAGC GATAGAAAGA
AAACCTCTGA GAATGGTTCA GGCTCTTCTG ATACACGAGG TCATGCACAT CGTTCTCCAG
CACTTTCGAA TAAAGCCCAA GGATGAAAGA GACAGAAAGA TATGGGATCT TGCCATGGAT
GCCGCTATAA ATCAGTACAT CCCGGAACTT GCAGCCTTTG GGATACCGCT CGACGTACTT
GTGAAGGAAG GTCACGCGAC GGACAACGAT ACGCTTTTCG TACTGCCACC TGAGTGGATG
ATGTTCGAAA ACGCTGAAGC GTATCATAAA TGGATTTTAG AGGAGATGGA AAGACTCGGA
AAGTACGATG TGGAAGTGGT GGCGGAGTTT CGGGATAACG TCGACGACCA CTCAGGACTG
TTCGAGGAAG ACGTTCCAGT TGAGATGATC CTCGATCTCA CAAAAGACAG AACCAAGAAA
GCTTTCAACC TCTTTGGAGA TACTCTTCCC TCTGGAGTAA GAAGGGAAGT TTCGCTCTCG
CTCGAAAATC CCGAACTGGA CTGGAAAACA CTCCTCAGGA GGTTCTTCGG TGTTTCGATA
AAAGCGGATC GCCACACGAC TCCATTGAGG CCAAACAGAA GGTACGATCA CCTTCCTGGC
TGGAGGAACG AGTACCTTCC CAGAATAGCC GCTGTGGTGG ACACCAGCGG AAGTATTGTG
GAGAAGGAGC TGAACCAGTT TATTTCCGAA CTCGAGAAGA TCTCGAACAT AGCAGGGGAA
GAACTCTGGC TCGTTCAGGT TGACAAGAGT GTTACATCGG CTATGAAGTA CAGATCTGGA
AAGTGGAAGG ATCTGGAGAT TGTGGGAGGA GGAAGCACAG ATCTTCAGCC AGCGATCGAT
TACTCAGAAA GGGTCCTCAG GTCAGAGGGA ACAGTTGTCT TCACGGATGG TCACACCGAC
GTTCCGATCG CAAGGAGAAG AATCCTTTTC GTGCTCTCAA GGTATCACAA CGAAGAATTT
CTCAAGGAAG CGAGAAAGAT GTATGGAAGA GATGCGGTGG TGGTCCTTTC ATGA
 
Protein sequence
MKGEEILKKA LLNIGKESPF YYYVLLGVKL VPSKNTRNLK LSFSTTGDVM LLYNPEAIER 
KPLRMVQALL IHEVMHIVLQ HFRIKPKDER DRKIWDLAMD AAINQYIPEL AAFGIPLDVL
VKEGHATDND TLFVLPPEWM MFENAEAYHK WILEEMERLG KYDVEVVAEF RDNVDDHSGL
FEEDVPVEMI LDLTKDRTKK AFNLFGDTLP SGVRREVSLS LENPELDWKT LLRRFFGVSI
KADRHTTPLR PNRRYDHLPG WRNEYLPRIA AVVDTSGSIV EKELNQFISE LEKISNIAGE
ELWLVQVDKS VTSAMKYRSG KWKDLEIVGG GSTDLQPAID YSERVLRSEG TVVFTDGHTD
VPIARRRILF VLSRYHNEEF LKEARKMYGR DAVVVLS