Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1813 |
Symbol | |
ID | 5170568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1821563 |
End bp | 1822756 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640564334 |
Product | hypothetical protein |
Protein accession | YP_001245389 |
Protein GI | 148270929 |
COG category | [S] Function unknown |
COG ID | [COG3864] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGGTG AGGAAATTCT CAAAAAGGCT TTGCTGAACA TAGGAAAGGA ATCACCGTTC TATTATTACG TTCTTCTCGG TGTCAAGCTG GTACCATCGA AAAACACGAG GAATCTGAAG CTCTCTTTTT CCACAACCGG AGATGTGATG TTGTTGTACA ATCCAGAAGC GATAGAAAGA AAACCTCTGA GAATGGTTCA GGCTCTTCTG ATACACGAGG TCATGCACAT CGTTCTCCAG CACTTTCGAA TAAAGCCCAA GGATGAAAGA GACAGAAAGA TATGGGATCT TGCCATGGAT GCCGCTATAA ATCAGTACAT CCCGGAACTT GCAGCCTTTG GGATACCGCT CGACGTACTT GTGAAGGAAG GTCACGCGAC GGACAACGAT ACGCTTTTCG TACTGCCACC TGAGTGGATG ATGTTCGAAA ACGCTGAAGC GTATCATAAA TGGATTTTAG AGGAGATGGA AAGACTCGGA AAGTACGATG TGGAAGTGGT GGCGGAGTTT CGGGATAACG TCGACGACCA CTCAGGACTG TTCGAGGAAG ACGTTCCAGT TGAGATGATC CTCGATCTCA CAAAAGACAG AACCAAGAAA GCTTTCAACC TCTTTGGAGA TACTCTTCCC TCTGGAGTAA GAAGGGAAGT TTCGCTCTCG CTCGAAAATC CCGAACTGGA CTGGAAAACA CTCCTCAGGA GGTTCTTCGG TGTTTCGATA AAAGCGGATC GCCACACGAC TCCATTGAGG CCAAACAGAA GGTACGATCA CCTTCCTGGC TGGAGGAACG AGTACCTTCC CAGAATAGCC GCTGTGGTGG ACACCAGCGG AAGTATTGTG GAGAAGGAGC TGAACCAGTT TATTTCCGAA CTCGAGAAGA TCTCGAACAT AGCAGGGGAA GAACTCTGGC TCGTTCAGGT TGACAAGAGT GTTACATCGG CTATGAAGTA CAGATCTGGA AAGTGGAAGG ATCTGGAGAT TGTGGGAGGA GGAAGCACAG ATCTTCAGCC AGCGATCGAT TACTCAGAAA GGGTCCTCAG GTCAGAGGGA ACAGTTGTCT TCACGGATGG TCACACCGAC GTTCCGATCG CAAGGAGAAG AATCCTTTTC GTGCTCTCAA GGTATCACAA CGAAGAATTT CTCAAGGAAG CGAGAAAGAT GTATGGAAGA GATGCGGTGG TGGTCCTTTC ATGA
|
Protein sequence | MKGEEILKKA LLNIGKESPF YYYVLLGVKL VPSKNTRNLK LSFSTTGDVM LLYNPEAIER KPLRMVQALL IHEVMHIVLQ HFRIKPKDER DRKIWDLAMD AAINQYIPEL AAFGIPLDVL VKEGHATDND TLFVLPPEWM MFENAEAYHK WILEEMERLG KYDVEVVAEF RDNVDDHSGL FEEDVPVEMI LDLTKDRTKK AFNLFGDTLP SGVRREVSLS LENPELDWKT LLRRFFGVSI KADRHTTPLR PNRRYDHLPG WRNEYLPRIA AVVDTSGSIV EKELNQFISE LEKISNIAGE ELWLVQVDKS VTSAMKYRSG KWKDLEIVGG GSTDLQPAID YSERVLRSEG TVVFTDGHTD VPIARRRILF VLSRYHNEEF LKEARKMYGR DAVVVLS
|
| |