Gene Tpet_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1796 
Symbol 
ID5171646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1805795 
End bp1806553 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content48% 
IMG OID640564317 
Producthypothetical protein 
Protein accessionYP_001245372 
Protein GI148270912 
COG category[S] Function unknown 
COG ID[COG4923] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.322424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACACGA TGATCACGGC CGGCGTGGAT GGTACCCGAA GAGGATGGGT GTACGCCCTG 
GTCGAAGAAC GCAAAGTTTT GGAGATAGGT CTCATGGAAC GCTTTTCGTT CCTGGGATTT
CCTGTGCTTG TGGACATTCC CATAGGGCTT CCGGAGACCG GTGAAAGAGT GTGTGACAGA
CTCGCACGGA AGATCCTTTC AAGGCGGGCA GGATGTGTGT TCACCGTGCC TGTCAGAGAA
GCGGTTTATC AGAAAACCTA TGAGGACGCT CTGATGATCA ACAGGAAAAA GCAGGGAAAG
GGATTTTCTG TTCAGTTCTG GAACATCGTG GAAAAAGTGA GGGAAGTGGA TCTCTTCTTG
AGAGAAAATC CTTCGCTGGT TAGTGTGATC AAAGAATCTC ATCCAGAGCT TTGCTTTTTG
AGGCTTTCTG GAAGACTTCT TGCCTCAAAA CACACAGAAG AAGGAATTAA GCAGAGAATA
GATGTTCTGA GGAGATTCCT CACACTCGAT GTGAAAGAAC TGAAAAAGAC TGAAGAAAGA
CTGAAAGTTG CCCTTCACGA CCTTCTCGAC GCTCTGGTAC TTGCCCTCTC CGGACAGTTC
TCACTGGAGA CGATCCCCGA AAACCCACCG AACGATCGCT ACGGTCTTCC GATGAGCATA
AAAATCCCAA AGATCATCAA TGGAAGATGG AACTTTCTGT CTACCGTGTC TCCCTCACGT
TTTCCCAGCG TTTTGCTTCA GAGTCTGGTA GGATATTAA
 
Protein sequence
MYTMITAGVD GTRRGWVYAL VEERKVLEIG LMERFSFLGF PVLVDIPIGL PETGERVCDR 
LARKILSRRA GCVFTVPVRE AVYQKTYEDA LMINRKKQGK GFSVQFWNIV EKVREVDLFL
RENPSLVSVI KESHPELCFL RLSGRLLASK HTEEGIKQRI DVLRRFLTLD VKELKKTEER
LKVALHDLLD ALVLALSGQF SLETIPENPP NDRYGLPMSI KIPKIINGRW NFLSTVSPSR
FPSVLLQSLV GY