Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1796 |
Symbol | |
ID | 5171646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1805795 |
End bp | 1806553 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640564317 |
Product | hypothetical protein |
Protein accession | YP_001245372 |
Protein GI | 148270912 |
COG category | [S] Function unknown |
COG ID | [COG4923] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.322424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACACGA TGATCACGGC CGGCGTGGAT GGTACCCGAA GAGGATGGGT GTACGCCCTG GTCGAAGAAC GCAAAGTTTT GGAGATAGGT CTCATGGAAC GCTTTTCGTT CCTGGGATTT CCTGTGCTTG TGGACATTCC CATAGGGCTT CCGGAGACCG GTGAAAGAGT GTGTGACAGA CTCGCACGGA AGATCCTTTC AAGGCGGGCA GGATGTGTGT TCACCGTGCC TGTCAGAGAA GCGGTTTATC AGAAAACCTA TGAGGACGCT CTGATGATCA ACAGGAAAAA GCAGGGAAAG GGATTTTCTG TTCAGTTCTG GAACATCGTG GAAAAAGTGA GGGAAGTGGA TCTCTTCTTG AGAGAAAATC CTTCGCTGGT TAGTGTGATC AAAGAATCTC ATCCAGAGCT TTGCTTTTTG AGGCTTTCTG GAAGACTTCT TGCCTCAAAA CACACAGAAG AAGGAATTAA GCAGAGAATA GATGTTCTGA GGAGATTCCT CACACTCGAT GTGAAAGAAC TGAAAAAGAC TGAAGAAAGA CTGAAAGTTG CCCTTCACGA CCTTCTCGAC GCTCTGGTAC TTGCCCTCTC CGGACAGTTC TCACTGGAGA CGATCCCCGA AAACCCACCG AACGATCGCT ACGGTCTTCC GATGAGCATA AAAATCCCAA AGATCATCAA TGGAAGATGG AACTTTCTGT CTACCGTGTC TCCCTCACGT TTTCCCAGCG TTTTGCTTCA GAGTCTGGTA GGATATTAA
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Protein sequence | MYTMITAGVD GTRRGWVYAL VEERKVLEIG LMERFSFLGF PVLVDIPIGL PETGERVCDR LARKILSRRA GCVFTVPVRE AVYQKTYEDA LMINRKKQGK GFSVQFWNIV EKVREVDLFL RENPSLVSVI KESHPELCFL RLSGRLLASK HTEEGIKQRI DVLRRFLTLD VKELKKTEER LKVALHDLLD ALVLALSGQF SLETIPENPP NDRYGLPMSI KIPKIINGRW NFLSTVSPSR FPSVLLQSLV GY
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