| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1790 |
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| Symbol | |
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| ID | 5170926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1800333 |
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| End bp | 1801346 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640564311 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001245366 |
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| Protein GI | 148270906 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00351385 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAG TGACCATAAA AGATATAGCA CGTGAGGCAG GTGTCTCGCC TTCCACGGTT
TCAAGAGTGA TAAACAAAAG TGCACCGGTG AGAAAAGAAC TTGAGGAAAA GGTACTTGAG
GTTATCAGGA AAATGGGATA CACACCAAAT CTGGTGGCAC GAAGTTTGAG AAAGGGATAC
ACCGATACAG TAGGATTCAT TGTACCTGAC ATAACAAACC CATTTTTTTC GCTCATTATT
AAAGGAGCTG AGGATTTCTT TAAAAAGAAA AAGATCTCTT TGGTAGTGTG TAGTTCAAAC
CATGATGTTA AAGAAGAAGA AAAGTTAATT GAGATGCTGG TTTCAAAGAA AATGGATGGA
CTGCTGCTGG TTGGGGCAGG AAGTAGCAAC CGAGTATTGA ACAGCATCTT AAACAAGGTG
AAAGTGGTTT TTGTGGATAG GGTATACGAA GGGTACGATG CACCGTATGT GGTTAGCGAC
AATTACAACG GTATGAAAAA ACTTGTGTGG TATCTGGTGA AGACAGGACA TAGATCGTTT
GCTTTTTTAA ATGGCGAAGA AGGAACGTAC AGTGCTACGG AAAGGTTAAG AGGATTCGTG
GATGCCCTCA AAGAAGCTGG GATAAAGGAC TATGTGGTGT TCTTTGGACA ATTCACCTAC
GAAAGTGGTT TTTCACTTGT GAAGAAGCTA GGGAAGATCC CCGATGCTGT CGTCTGTGGA
AACGACCTTA TGGCGTACGG GGCAATAGAT GCCCTGGAGG AAATGGGATA CGAGGTTCCC
AAGAATGTAA GTGTTACCGG ATTCGACGAT CTACCGTTCA GCAAGCATTA CAAACCATCG
CTGACAACAG TTAGACAACC TTTTCATGCG ATGGGTTATG AGTCCGCAAA GATACTTCAT
TGGATGATAA GCGGAAAAAA CAAAAAGAAT AAAAAGATCG TGCTTGAAAC AGAGTTGATC
ATCAGAGAAT CAACCAAAGG AGGTTCAGAG TATGAAACGA GTGGGAATTC TTAA
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| Protein sequence | MKKVTIKDIA REAGVSPSTV SRVINKSAPV RKELEEKVLE VIRKMGYTPN LVARSLRKGY
TDTVGFIVPD ITNPFFSLII KGAEDFFKKK KISLVVCSSN HDVKEEEKLI EMLVSKKMDG
LLLVGAGSSN RVLNSILNKV KVVFVDRVYE GYDAPYVVSD NYNGMKKLVW YLVKTGHRSF
AFLNGEEGTY SATERLRGFV DALKEAGIKD YVVFFGQFTY ESGFSLVKKL GKIPDAVVCG
NDLMAYGAID ALEEMGYEVP KNVSVTGFDD LPFSKHYKPS LTTVRQPFHA MGYESAKILH
WMISGKNKKN KKIVLETELI IRESTKGGSE YETSGNS
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