| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1786 |
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| Symbol | |
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| ID | 5170129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1796435 |
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| End bp | 1797940 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640564307 |
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| Product | DNA mismatch repair protein MutS domain-containing protein |
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| Protein accession | YP_001245362 |
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| Protein GI | 148270902 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00151585 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGTAC TTTTGATGTA CCCAGACAAG GATTTCAATT TGAAAAGAGA GTTGCCTTTC
AATGCAGATG ATTTGACAAG AGATCTCGGT TTAGATGTGA TATTCGATCA CATGGCAAAG
GGAGATGGTT ACCTGTATAG TGTTGTGAGA AATGTCATTC TGAATCCAGA AACCGATCTG
GAGACGATAA AGTACCGCCA GGAAATTCTC AAAGATTGTA TGAAAAACCA GAACGTCGTA
AGGCGGTTGT TTCAGATACC GCTGGAGGTT CAAGAAAACA AGAAGAAAAA TTGGTGGGGG
GTTTTTGGAT GGAAAACTCC TATCAATGTC CTGAACGGCT CCAGAAAAGC TTTAGAAGCC
ATGCTGGTAG CGCTCAGAGA GCTTAAAAAG TTGGCAGATG AACATCGTCA CAATTTTCAT
TCTCGAGGCT TCACAAGGTT TTTCGAGATG ATAAGGACGG AACTGGATGA AGCCTACTTA
CAAACTGTGG AGAAGCATCT CATTAATTTG AGATTTTCAA ACGGTATGTT GTTCAAAGTA
AAACTCGGAA AAGGTAACGA AGGAAAAGAT TACACCCTCT GCCAGCCTGA CTCTTCAAGA
AGCATCCTGA AAAGACTACT CAGTGTGAGA CGAATGTATT CTTATAAATT ACATCCAAGA
GATGAAAGTG GAGCACGAGC ACTGGAGAAG TTGACCAATT TGGGACTTCG CAGGGTAGCA
GCCACAGTTT ACTACGCGGC AGAGCATGTA GAAAAATTTT TGAACAAAAT TCGAGAAGAA
CTGGCTTTCT ATATTGGTTG TCTCAACTTG CTGGAAGATG TAGAAAAATC GAAGATAAGT
TTTCCCGATC CCAAACCAAT TGATGAGGAC GATGTAACCG CCTTCAGAGG GCTTTACGAT
CTTAGTTTGC TTCTAATAAA GAGAAATAGA GTGATAAGTA ACGATCTGAA CACGCGTGGT
AAAAGAGTTT TTTTCATCAT GGGAGCGAAT CGCGGTGGGA AGACCACTTT CCTGAGAAGT
ATAGGGCAAG CTCAGCTGAT GATGCAAGCT GGTATGTTCG TTCCGGCGTC GTACTTTGAA
TCGAACGTTT GCAAAGGAAT TTTTACGCAC TTTAAAAGAG AGGAAGATCC AAGCTTGAAG
AGAGGAAAAT TTGAAGAAGA ACTTGTCAGA ATGAATGAGA TAGTCCTTCA TCTGCATAGA
AGGTCTATGG TGCTATTCAA CGAGTCCTTC TCATCTACGA ATGAAATGGA GGGTTCCGAA
GTGGCCTACC AGATTGTTCG AGCTCTACTG GACAGCCGTG TTAAAGTTTT TTACGTAACA
CACGTGTACG AACTGGCCCG CCGTTTTACA GGAGATGAAA GAGTGATGTT TCTACAAGCA
GAAAGGAAAC CTACCGGTGA AAGAACCTTC AAGATCAAAG AAGGCCTGCC TTCGCAGACA
AGTCATGCGA AGGATATATA CCTCAAAGTG TTCAGATCAT CAACTTCAAC TTCACCATCC
TCTTGA
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| Protein sequence | MRVLLMYPDK DFNLKRELPF NADDLTRDLG LDVIFDHMAK GDGYLYSVVR NVILNPETDL
ETIKYRQEIL KDCMKNQNVV RRLFQIPLEV QENKKKNWWG VFGWKTPINV LNGSRKALEA
MLVALRELKK LADEHRHNFH SRGFTRFFEM IRTELDEAYL QTVEKHLINL RFSNGMLFKV
KLGKGNEGKD YTLCQPDSSR SILKRLLSVR RMYSYKLHPR DESGARALEK LTNLGLRRVA
ATVYYAAEHV EKFLNKIREE LAFYIGCLNL LEDVEKSKIS FPDPKPIDED DVTAFRGLYD
LSLLLIKRNR VISNDLNTRG KRVFFIMGAN RGGKTTFLRS IGQAQLMMQA GMFVPASYFE
SNVCKGIFTH FKREEDPSLK RGKFEEELVR MNEIVLHLHR RSMVLFNESF SSTNEMEGSE
VAYQIVRALL DSRVKVFYVT HVYELARRFT GDERVMFLQA ERKPTGERTF KIKEGLPSQT
SHAKDIYLKV FRSSTSTSPS S
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