| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1784 |
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| Symbol | |
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| ID | 5170756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1793149 |
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| End bp | 1794795 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640564305 |
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| Product | M3 family oligoendopeptidase |
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| Protein accession | YP_001245360 |
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| Protein GI | 148270900 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02289] oligoendopeptidase, M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0212975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTGGA AAGACGTTGA GCCTCTGGTG AACGAACTTC TGAAGTTTCC TATCTCTTCT
TCTGAAGACT TCAGAAATTT TGTCAACAGG GTAACGGATT TCTTCGACCA GGTGGAGGAG
GAACACGCCT GGCTCTACAT CAGAATGACT GTGAACGCAG ACAACAAAGA GTACGCAAAA
GCCTACGAGG AGTTTATGAA AGAGGTCGTT GCAAAACTCA GACCCTATGA ACAGAAGATC
AAAGAAAAGA TCGTCGAAAA CGAACGTTTT GCACCACTTG GATACGAGCA CATGATAAAG
ATCCTCAAGA ACGATGTGGA ACTGTTCAGG GAAGAGAACA TCCCTCTTCA GGTGAAGGAG
AGTATACTGG CCAAAAATTA CGGAACACTC GTTGGAAGCA TCGAGGTGGA ATTCAAGGGA
GAAAAGAAAA CCCTCCAGCA ACTCTCCGCC TATCTGAAAG ATCCCGACAG GTCCACAAGA
GAACTTGCCT GGAGGAAAAG ATACGAAGGA ATATGGAGAG TGAGAGAAAA ACTCAACGAA
CTCTTCGACG AGCTCAAAAA CATAAGACAT CAGCAGGCTC TGAACGCCGG CTTCTCCAAC
TACAGAGACT ACATGCACAG GTTGAAGGGA AGATTCGAAT ACGCACCGGA GGATCTGTTT
GAGTTTCACT CTGCTGTGGA GAAAGAAGTG GTTCCGTACC TGATGGAAAG AACAAAACTC
AGACAGAAAA AACTCGGTGT TGAGAGTGTA AGGCCGTGGG ACACAGCGGT GGATGTGGAT
GGTAAAGTGT TGAAGCCATT TTCTTCGATA GACGAGTTCG TAGAAAAAAC ACAGCGGGCC
CTGGAAAGAG TGAACCCTCT CTTTGCAGAA AGGTTTCGCC TCATGAAAGA GAAAAGACTC
CTTGACCTTG AAAACAGAAA AGGAAAGGCT CCAGGTGGCT ACAACCACAC ACTTCCAAAG
ACGGGCGCTC CTTTCATCTT CATGAACGCG GTTGGACAGC CAGGGGATGT GAGAACGATC
TTTCATGAGC TGGGGCACTC GATGCATTCG TTTGAAACAC TGAGCCTCCC TGTGTTTTAC
AGACCCCACA GAATGGAAGT CGCTGAACTT GCTTCGATGT CAATGGAACT CATCTCCATG
GAGTACTGGA ATGAGTTCTA CGAAGACCAG GAAGATCTCA GGAAGGCAAA GATCGAAGAA
CTCGAAGGAG CGCTTTACTT TTTGCCGTGG TGCATGACCG TGGACGCCTT CCAGCACTGG
ATCTACACCA ACCCAGATCA CACACCAAAA GAAAGGGACG AATACTTTGC TTACCTGATG
GACAGGTTCA ACCCGGGAGT AGACTGGAAC GATCTGGACG AAGAAAAGAA AACGAGGTGG
TTCTTTCAGC TTCACATCTT CGAGGTTCCG TTCTATTACA TAGAGTATGG AATAGCCCAG
ATCGGTGCTC TTGCAATTTA CAGGAACTAT CTGGAAGACT CAGAAAGGGT TCTTAAAAAT
TACACCGAAT TTCTGAGGGT CGGATGCTCT CTTCCAATCG ATAAGGCCTA TGAAACAGCA
GGAATAAAGC TGGACTTTTC CAGAGACTAC TTGAGGGAAA TAGTGAATTT TGTTGCAGAA
GAAATTGAAA AGCTGGAGAT GGTATAA
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| Protein sequence | MQWKDVEPLV NELLKFPISS SEDFRNFVNR VTDFFDQVEE EHAWLYIRMT VNADNKEYAK
AYEEFMKEVV AKLRPYEQKI KEKIVENERF APLGYEHMIK ILKNDVELFR EENIPLQVKE
SILAKNYGTL VGSIEVEFKG EKKTLQQLSA YLKDPDRSTR ELAWRKRYEG IWRVREKLNE
LFDELKNIRH QQALNAGFSN YRDYMHRLKG RFEYAPEDLF EFHSAVEKEV VPYLMERTKL
RQKKLGVESV RPWDTAVDVD GKVLKPFSSI DEFVEKTQRA LERVNPLFAE RFRLMKEKRL
LDLENRKGKA PGGYNHTLPK TGAPFIFMNA VGQPGDVRTI FHELGHSMHS FETLSLPVFY
RPHRMEVAEL ASMSMELISM EYWNEFYEDQ EDLRKAKIEE LEGALYFLPW CMTVDAFQHW
IYTNPDHTPK ERDEYFAYLM DRFNPGVDWN DLDEEKKTRW FFQLHIFEVP FYYIEYGIAQ
IGALAIYRNY LEDSERVLKN YTEFLRVGCS LPIDKAYETA GIKLDFSRDY LREIVNFVAE
EIEKLEMV
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