| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1766 |
|---|
| Symbol | |
|---|
| ID | 5170081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1767957 |
|---|
| End bp | 1769774 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640564287 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001245342 |
|---|
| Protein GI | 148270882 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.053685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGTT TTGTTGTCAA CATCTGGCTT CAAACCTGGT CACGTATTTT TGGAGCTGAC
GTTGTAAAAG AAATGAAGAA TAAGTACAAT GTTCCCGATA CTTTTTACAA TCCCCTCGAG
GATGTCCCCG ATGAACTCCC CGTGAATATG TCCCGGGAAC TGGCATCAAG AAAAGGGATC
ACTTACGAAG AACTCTGGTA CAAGACAGGT AAAGAAAACC TGAAAACCTT CTTCGAACAT
TACCCGGAAT ACTTCAAAAA GACGAGTTTT CTTTCTTTCA TGGCTGCTAT GGACATGGTA
CACAGAGTTC TTACCAGAAG GATCAAAGGA GCGAAACCTC CGAGAATCTT CTTCAAACTC
CTTTCATCAC GTAAAGCGCT GATAAGGTAT GAATCGAAAC GAAATTTCAA AAATTATTTC
CTTGGACTCA TGGAAGCGGC TTCTGAGTTT TTTAATGACC CGATCAAATA TAAAGTGGTG
GGAGAAGGTA GCATCGACGG TAGAAACTAC CTCGAAGTCG AAGTGGAAGC CACAAAAGAG
TACGGAAAAT TCGAAAAACT AAGGAGTTTG ATCGTTCTTG GGGCAGGATT CGTGAAATCT
CTGGTTCCGA TAAATGTTTT CATGATACCA CTGTTCAGTT TCGTTTTTAT CTTTATCATC
TTCACATTTT TGCCATTCGG AAACCTGATC AGGTCTATTT TAAGTGCCCT TCTCATTTCT
CTTGTAATGG TGATTGACAC GAAAGACCTC AAAAAGGGAT TGAATGTTCT GAAAGAAGCT
TTAAAACTCG TTTCTCGAAA GAACTTTGAC AATCCAGTTA CAGTAAGTGG GCTAAAAGAG
TTCTCTGATC TTTCCGCTGA ACTGAACAGT GCCGTAGAAA AGATCAAAGA AATCATAGTG
GGTATACTGG GAGACGTTCA AGAAATAGAC GCCTACTCGT CGAGAGTAGT AGATGCAGTA
AATTCCATGA AGGAACAGCT TGAAACCATG AGTTCTCTTT CGAGTGAAAT AGCCACCACA
GCTGTACAGA TAAGTAACGA TACGGAAAGG ATATCGAGTG CAGTTACAGC AAACGTGGAA
ACCATCACAT CGATCATTTC CGAACAAACA CAAATCATAA AATCTCTCAA TGAGGCCGTG
TCACTCATTG TTCAATCAGC AAATAACGTT GAGCAATCAG CGGACGGTAT AGTGAAGATG
AGTCAGAGGT TCTCCAAACT TGTTGAAGAG GCCAAAAATC TCCAGGAACA GGCTGGTATG
ATCATGCAAG TTGCCGCAAC CGTATCTAAT ATAGCTGAAC AAACGAATCT TCTTGCACTC
AATGCCGCCA TAGAAGCTGC AAGGAGTGGA GAAGCCGGAA GAGGTTTTGC GGTGGTTGCC
GATGAAATCA GAAAGCTTGC CGAAGAGAGT CGCAGCTCCT CTTCAAAGAT AGCAGAGTAT
CTATCGACCA TAAACACAGG TATCGACAAA CTCGTTCAAA CCATACAAGC TGAATTTGAA
GAGATGAAGG AACAATCGAA TCAGCTCCTC GAGAGTTCGG AGAGGAACAA AGAATCCAGC
GAAGTTATAT CTTCCATATC GCAAAAACTC AGCGATCTCA TAGATGTCCT GAATCAACAG
GTTGACAACC TCAACGGTAT AACAAACAGC ATCCAGAATC TGCTTGCAAT TTCTGAAGAG
AGCTCAGCAA CAGCAGAAGA AATAAGTTCC TCGATACAGA ATTTCTTCTC CCAGTTGAAA
GTTGTTCTTG ATAGCGTGAA CGAAACTATA AATCTGCTTT CGGTGATAAA GGAAAACTTC
AAAGACATGG TGCTGTGA
|
|---|
| Protein sequence | MKGFVVNIWL QTWSRIFGAD VVKEMKNKYN VPDTFYNPLE DVPDELPVNM SRELASRKGI
TYEELWYKTG KENLKTFFEH YPEYFKKTSF LSFMAAMDMV HRVLTRRIKG AKPPRIFFKL
LSSRKALIRY ESKRNFKNYF LGLMEAASEF FNDPIKYKVV GEGSIDGRNY LEVEVEATKE
YGKFEKLRSL IVLGAGFVKS LVPINVFMIP LFSFVFIFII FTFLPFGNLI RSILSALLIS
LVMVIDTKDL KKGLNVLKEA LKLVSRKNFD NPVTVSGLKE FSDLSAELNS AVEKIKEIIV
GILGDVQEID AYSSRVVDAV NSMKEQLETM SSLSSEIATT AVQISNDTER ISSAVTANVE
TITSIISEQT QIIKSLNEAV SLIVQSANNV EQSADGIVKM SQRFSKLVEE AKNLQEQAGM
IMQVAATVSN IAEQTNLLAL NAAIEAARSG EAGRGFAVVA DEIRKLAEES RSSSSKIAEY
LSTINTGIDK LVQTIQAEFE EMKEQSNQLL ESSERNKESS EVISSISQKL SDLIDVLNQQ
VDNLNGITNS IQNLLAISEE SSATAEEISS SIQNFFSQLK VVLDSVNETI NLLSVIKENF
KDMVL
|
|---|
| |