| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1746 |
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| Symbol | |
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| ID | 5170114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1743244 |
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| End bp | 1744545 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640564268 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001245323 |
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| Protein GI | 148270863 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2461] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000524256 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGAG AAAAAGTGGA ACTTTTTAAG GAAGTGCTGA AAAAACTCCA CGAAGGGGAA
GACGTGGAAT CCTTGAAAAA ACAATTCGGA GAACTGCTCT CGCAGATTCC ACCGTTCGAG
ATACCCGTCA TCGAGCAGGA ATTGATAAAA AGCGGTGAGA TAGACGTAAG AGACATCATC
AAGATGTGCG ATCTTCATGT TGAGTTCTTC AGGGGAGCCG TGTCAGAAGC CGGCAGAGAA
ATAGAAAAGC TCCCGAATGG ACACCCGCTA AGGACGCTCT ACGAGGAGAA CAAACAGATA
CTAAAAGATG CGGAAGCTTT GAGTTTGCTT GCTTCCAGCA CGTTCTCTCT TCCAAAAGAC
GATCCTCGCA GGAAACAGTT CTACGAAAAA CTCGTGCAGC ACGTCTCAGG GCTTCACAGA
ATAGGTCTCA CCCATTACAC GAGGGAAGAG ATGCTGATAT TCCCATACAT CGAGAGAAGA
GGTATCACAG CCGTTCCAAC GGTCCTCTGG TCCAAACACG ACGAGATCAG ATTGAAGATA
AGACTCCTTC TCAATCTTTT GAAGAAAGAA GAATCTGATG AACGGCTGAA AGAAGAAGCC
CTGGAACTTT CAAGGATGCT CTCAGACATG GTCTTCAGAG AAAACAACAT ACTCTATCCG
ACACTGAAGG TGCTTTTCTC TGAAGGTGAG TGGAAAGCGA TAAAGCTGCT GGAGAAAGAC
ATAGGATACT ACAAGATTGA AGTGACAGAC GAGTGGGAAA CTTCAGCGGA GCCTGTTCTT
CCACACCAGA TGGATCCAAC CGTTTCCCCT GAAACTTACG AGAAACTTCC CGATGAGATC
AAAAGGGTTG CCGGAATGCT CACTCCAGAC ACCGAATACT CGTTGGTTCG AGACAACGAT
ATGGAAATAG AAAGTGGTTA TCTGTCTTTG GAAGAACTGA ACGCTATTTT CAAAACGTTG
CCGTTCGATA TAACCTTTGT GGATAAACAC GGAAGAGTAC GTTTCTTCTC TGGAGGTCAC
AGGATCTTCC ACAGAGCTCC CACCGTTCTT GGAAGACCGG TCCAGTTCTG TCATCCCCCA
AGGAGCGTTC ATATCGTGAA CAAAATTCTC AAGGCTTTCA AAGAGGGAAG AAAAGAACCT
GCGGAGTTCT GGATCAACAT GGGTGACAGA AAGATCCACA TACGATACTT CCCGGTCCTG
GACAAAGAGG GAAACTATTT GGGGACACTG GAAGTGGTGC AGGACATTAC AAGGATAAAA
GAACTCGAAG GAGAAAAGAG ACTTCTCGAC TGGAAAGACT GA
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| Protein sequence | MEREKVELFK EVLKKLHEGE DVESLKKQFG ELLSQIPPFE IPVIEQELIK SGEIDVRDII
KMCDLHVEFF RGAVSEAGRE IEKLPNGHPL RTLYEENKQI LKDAEALSLL ASSTFSLPKD
DPRRKQFYEK LVQHVSGLHR IGLTHYTREE MLIFPYIERR GITAVPTVLW SKHDEIRLKI
RLLLNLLKKE ESDERLKEEA LELSRMLSDM VFRENNILYP TLKVLFSEGE WKAIKLLEKD
IGYYKIEVTD EWETSAEPVL PHQMDPTVSP ETYEKLPDEI KRVAGMLTPD TEYSLVRDND
MEIESGYLSL EELNAIFKTL PFDITFVDKH GRVRFFSGGH RIFHRAPTVL GRPVQFCHPP
RSVHIVNKIL KAFKEGRKEP AEFWINMGDR KIHIRYFPVL DKEGNYLGTL EVVQDITRIK
ELEGEKRLLD WKD
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