Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1727 |
Symbol | |
ID | 5170154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1722830 |
End bp | 1723681 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640564253 |
Product | hypothetical protein |
Protein accession | YP_001245308 |
Protein GI | 148270848 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTGA AGGTTCTCCT TTCGGGTTTC TCCTACTCCA CGATATTCGG ACTTTCTTTT CTTTTCACGA AGAACGCTCT CGATCATGTG ACTCCCCTGA CTTTTCTTTC TTTCAGATTC AGCGTTGCTT TTCTCACTTA CCTTCTTCTT TTGATAACCG GCGTTGTGAA GCTTGGAAAG AAACCCTACT GGAAGCTCTG GAAACTCGTC CTGTTCCAGC CTGTGCTTTA CTTTCTTTTC GAAACGTACG GCCTTCAGAG GGTGAACTCC TCGGAAGCGG GTATGATCAT TGCCCTCATC CCGGTCGTTG TCAACCTTCT TGCTCCTTTC ATACTCAAAG AGAAGGGAGA TCTTCTTCAC TACTTTCTTG TGGGAATGGG TTTTCTTGGA GTTTCGTTGA TAGTTGGTTT CAACATCACG CCTGGGAACA TCATTGGGAA AGCCTTCTTA CTCTTAGCTG TTCTCTCCGG AGCGATGTAC AGTGTGCTTT CGAGAAAGTT TTCAAAAGAG TTCACACCTG CTGAAATCAC TTTCTTCATG ATGATGACCG GAGCAGTTTT CTTCACACTT TTGAGTCTTT CAACAGGAGA TTTCAGACCG GTGTTCAACG TCCATGTGGT AATCGGTACC CTGTATCTCG GTGTTCTTTC TTCCACCGTC GCGTTTTTCC TTCTCAACTA CGCCATAGGG AAAATGTCTC CCATCTTCAC CACCCTCTTT TCCAACTTCA CAACGGTGAT TTCTGTGATA GCTGGGGTTG TTTTCAGAAA CGAAACGGTG GAAATTCAAC AGATTGCAGG GATGGGATTG ATAATCGTTT CTATAATCGC AATGGCGGTT CGTAAGGAGT AA
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Protein sequence | MDLKVLLSGF SYSTIFGLSF LFTKNALDHV TPLTFLSFRF SVAFLTYLLL LITGVVKLGK KPYWKLWKLV LFQPVLYFLF ETYGLQRVNS SEAGMIIALI PVVVNLLAPF ILKEKGDLLH YFLVGMGFLG VSLIVGFNIT PGNIIGKAFL LLAVLSGAMY SVLSRKFSKE FTPAEITFFM MMTGAVFFTL LSLSTGDFRP VFNVHVVIGT LYLGVLSSTV AFFLLNYAIG KMSPIFTTLF SNFTTVISVI AGVVFRNETV EIQQIAGMGL IIVSIIAMAV RKE
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