| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1726 |
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| Symbol | |
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| ID | 5170199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1721540 |
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| End bp | 1722805 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640564252 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001245307 |
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| Protein GI | 148270847 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTGA TATTCATTCT GATTCTCATG GTCCTCCTGA ACGCGGATCA GATGGTGATG
TCTCCGAACA TAGGAGCGAT AGAACAGGAG TTCAACATCA CTGATGCTCA GATAGGTCTC
GTTGCGTCGT CTTTCACGGT GATAGGGGCT CTTGTGAGCC TTGTGTGGGG GTACCTTGCC
GACAGATACA GCAGGAAGAA CCTTCTCATC TACTCCATTC TCGTTGGTGA GATTCCCTGT
CTCATGAGTG CGTTTTCTCA CTCCTACGGA GAACTCTTTT TCTGGAGAGC CCTCACCGGA
ATAGGTGTGG GAGCGTCCTT TCCCATTGTT TACTCGATGA TAGGAGACAT GTTCGACGAG
GTAAAGAGAG GAAAGGTCGT GGCTCTTATA TCTTCTGCGA TCTCCATAGG AAGCGTTCTT
GGGATGATCG TTGGGGGTTT TTTGGGACCG AAATACGGTT GGAGAGTTCC CTTCATCGTG
GTTTCTGTTC CAAACATCGC CCTTGCGATT TTATCCATCT TCGTTCTGAA AGAACCGAAA
AGAGGTGCCT TTGAAAAAGG CATCGGTGAA CTCGTTCAAT CCGGGTACGA GTATCCGAAA
GCGCCGAAAC TCTCTGATTA CGCAAAACTT GTGAAGGTGA AAACGAATCT TCTTTTGTTC
TTTCAGGGTA TAGCAGGGAC TATTCCCTGG GGTGCCATTC CTTACTTTCT TGTGGAATTC
TTCAGAAGAG AAAGAGGTCT TTCGGTGGAG ACGGCTACCC TTGTTTTCCT CGTGTTCGGT
CTTGGAAACA TCGCTGGAAT CATCCTCGGA GGACTGTGGG GAGCGAGCAT CTACGCGAAA
TCCAGGCCAT TTCTACCGCT GTTTTGCTCG ATCACAACCG CTCTTGGAAC TTTCTTCACC
GTTATGACCC TGGACTACGT GGGAAGTCTT CTCGTTCTCA TGTTACTTGG TTTCGTCGCT
TCTTTCACCG CGAGTCTCAC GGGTCCGAAC GTGAAGTTCA TGCTTCTGAA CGTCAACGAA
CCACAGGAAA GAGGAAGGAT ATTCTCCATA TTCAACCTCA CCGATTCGCT CGGAACGGGA
TTTGGAAAAT TCGCGGGAGG AGTGATGTCC GTTGCCCTCG GATCTCTCGG AGCTGCCTTG
AAAGTCTCCG CTTATTTCTG GCTTATCTGT GCGGTGCTGC TCTTTGTTCT GGTTTTTTAC
TTCACAAGGG ACGTGGAAAG ACTTCAGAAA AGCATGATGA AGCTGGCCAA AGATATTTCT
TCTTGA
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| Protein sequence | MAVIFILILM VLLNADQMVM SPNIGAIEQE FNITDAQIGL VASSFTVIGA LVSLVWGYLA
DRYSRKNLLI YSILVGEIPC LMSAFSHSYG ELFFWRALTG IGVGASFPIV YSMIGDMFDE
VKRGKVVALI SSAISIGSVL GMIVGGFLGP KYGWRVPFIV VSVPNIALAI LSIFVLKEPK
RGAFEKGIGE LVQSGYEYPK APKLSDYAKL VKVKTNLLLF FQGIAGTIPW GAIPYFLVEF
FRRERGLSVE TATLVFLVFG LGNIAGIILG GLWGASIYAK SRPFLPLFCS ITTALGTFFT
VMTLDYVGSL LVLMLLGFVA SFTASLTGPN VKFMLLNVNE PQERGRIFSI FNLTDSLGTG
FGKFAGGVMS VALGSLGAAL KVSAYFWLIC AVLLFVLVFY FTRDVERLQK SMMKLAKDIS
S
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