Gene Tpet_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1720 
Symbol 
ID5170240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp1717390 
End bp1717992 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content41% 
IMG OID640564246 
ProductTetR family transcriptional regulator 
Protein accessionYP_001245301 
Protein GI148270841 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTGTCGA AGAAAGATGC GATATTGAAA GCGTCGATCG AGGTTTTTGG AAAAAAAGGT 
TACGATCGAG CCACAACAGA CGAAATAGCG GAGAAGGCCG GAGTAGCCAA GGGATTGATC 
TTTCACTATT TCAAGAACAA AGAAGAACTG TACTACCAGG CATACAGGTA TGTTGTAGAG 
AAACTGCAGA GGGAATTCAA GAATTTTCTC AGGGAGAACA GAAATAGAGA CATCTTCGAT 
TTCATGGAAC GATGGATAGA AAAGAAACTG GAGTACTCTG CTTCTCATCC CGAAGAAGCG 
GATTTTCTGA TAACACTTGT GAGTGTGGGT GAAGATCTCA GGAAAAGAAT ACTTCTCGAC 
CTCGAAAAAT CACAGAGGGT CTTTTTCGAC TTCGTAAGGG AAAAGTTGAA AGACTTAGAT 
CTCGCAGAAG ATGTAACGGA GGAAATCGCA TTGAAATTTC TGATGTGGTT CTTTTCCGGA 
TTCGAAGAAG TCTATCTGAG GACCTATCAG GGTAAGCCTG AACTATTGAA AAAAGACATG 
AACGTACTCG TTGAAGAAGT GAAGGTCATG CTCAGGATTT TGAAGAGAGG TATGACAAAA 
TAA
 
Protein sequence
MLSKKDAILK ASIEVFGKKG YDRATTDEIA EKAGVAKGLI FHYFKNKEEL YYQAYRYVVE 
KLQREFKNFL RENRNRDIFD FMERWIEKKL EYSASHPEEA DFLITLVSVG EDLRKRILLD 
LEKSQRVFFD FVREKLKDLD LAEDVTEEIA LKFLMWFFSG FEEVYLRTYQ GKPELLKKDM 
NVLVEEVKVM LRILKRGMTK