Gene Tpet_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1718 
Symbol 
ID5170111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1715872 
End bp1716981 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content46% 
IMG OID640564244 
Productmajor facilitator transporter 
Protein accessionYP_001245299 
Protein GI148270839 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGTACA GACTCATGTC GATAGAATTC TTTGTCTACG GCACGATGGC CGTTTATTCA 
CTGTTGAGTC AGTTTCTGGC AAACGAAGAA CTCTCGAAAT CTCAGATAGG CATTCTGATG
TCTATCCTGC CGATCACATC ACTCTACGCG AACCATCTAA ATTTCGAAAT CGCCTCTACC
ATAGGAAGAG TGAACTGGCT GAAAAAAGTG ATTCTGTTCG CTGGAATCCT CTTCTGGGGG
CTGTTTCTGT TCGAGGAGTT CTACCTGAAA CTCATATTCA TGTCAGTGTT CGCTTTCTTC
TTCTCTGCGG TGACTCCTCT TGCTGAGTCC GTTATCGTGG ACATCACACA CCAGATGAAA
ATGAACTACG GCAGGATCAG GTTGTTTGGA ACCTTTGGGT TCTCTTTCAC AGCGCTTTTG
ATGAGCGGAC TCATCAGACT GGGTTTCGTC ACGATATTTT ACGTTTTCAC TGCCTTGATG
CTTTTGACCT TTTGGATACT GAAGCCGATG AAAGAAGTAG ACCTCGGTGA GGAAGAAAAA
AGAAAAAGCA AAAAACCTCT TCCCACTTTC TTCTGGCTCC TTCTCCCTGT AGTGATCTTT
GGTATAGCGG CAAACAATTT CAATTTTGTC TTTCTACCCG TTTTGATGAA GGAAAGAAAC
TACGACGTGT CTCTTGCGAG TATAGCCCTT TCTCTCATGG CCATCACAGA GACGCCGTTC
CTCCTGTGGG CCGATGAGAC AGTGAAAAGA CTCGGTGTGG GTTTCATGCT CGCTTCGGGT
GTGTTCGTTG TGGGTCTCAG AAACCTGCTG GTAACTCTGA CAAGTTCTCC AGCTACTCTG
CTGATGGTTC AGCTCTTGCA GGGATGGACT TACATAGTGA TCTATTACTC CATGATGTTT
CTCATTCGAA CGTTTGGTCC CGCAAGGATC AGAGCACAAA AGTATTTCTG GGTCGCTATG
GGAATAGGGC CGTTCATAGG CTCATCGGTA GGTGGTGTGC TCGCAGAAAA TCTTGGTCTT
ATCGATTCAT ACAGGATTCT CGGTTTGGTT CCCATGATCG TTTCTCTTTT TGTCTTTCTT
TTCCTCAGGA AGTACGAAAG AGCTTCTTGA
 
Protein sequence
MRYRLMSIEF FVYGTMAVYS LLSQFLANEE LSKSQIGILM SILPITSLYA NHLNFEIAST 
IGRVNWLKKV ILFAGILFWG LFLFEEFYLK LIFMSVFAFF FSAVTPLAES VIVDITHQMK
MNYGRIRLFG TFGFSFTALL MSGLIRLGFV TIFYVFTALM LLTFWILKPM KEVDLGEEEK
RKSKKPLPTF FWLLLPVVIF GIAANNFNFV FLPVLMKERN YDVSLASIAL SLMAITETPF
LLWADETVKR LGVGFMLASG VFVVGLRNLL VTLTSSPATL LMVQLLQGWT YIVIYYSMMF
LIRTFGPARI RAQKYFWVAM GIGPFIGSSV GGVLAENLGL IDSYRILGLV PMIVSLFVFL
FLRKYERAS