Gene Tpet_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1716 
Symbol 
ID5171419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp1713707 
End bp1714846 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content49% 
IMG OID640564242 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_001245297 
Protein GI148270837 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCAGAG TTCTCAGCGT CTTCGGAACA AGACCCGAAG CAATAAAGAT GGCACCTCTC 
GTGAAAAAAC TCGAAGAAGA AGAACGAAAC GTGGAAAGTT TGGTCTGTGT CACCGCTCAG 
CACAGACAGA TGTTGGACCA GGTGCTGGAA GTTTTCGATA TAAAACCGGA TTTTGACCTG 
AACATAATGA AAGAGCGGCA GAGTCTTGCC GATATAACTG TGAACGCACT GTCGGGTCTC 
TACGATTTGA TTGAAGAGTT AAAACCGGAT ATCGTACTGG TTCAGGGAGA CACAACGACT 
ACGTTCGCAG GAGCACTCGC GGCCTTCTAT CACAGGATCC CGGTTGGCCA CGTTGAAGCA 
GGCTTGAGAA CAAATGACAG GTACTCCCCT TTCCCAGAGG AGATCAACAG AAGACTAACG 
GGTGTTCTTT CTACACTGCA TTTCGCACCT ACAAAGAGGA ACAGAGAGAA CCTTCTTAGG 
GAAAACGTCA TGGGAAAGAT CTACGTGACT GGAAACACGG TGATAGACGC CCTCAGGTAC 
ACCGTGAAGG AGAGCCACGT TTTTGAGAAT CCGGTTTTGA GGAATATGGA TTTTTCCGAC 
GGAAGGTACA TCCTTCTCAC TTCCCATAGA AGAGAGAACA TCGGAAAGCC CCTTGAAAAC 
ATCTGTAAAG CAGTGAGAAG GATCGTTGAA GAATTCGAAG ATGTGAGGGT GATTTACCCG 
GTTCACATGA ACCCCGCCGT GAGAGAGATC GTCTTCCCGA TGCTCGAAAA CATGGAGAGA 
GTCTTCTTGA TCGACCCCGT GAATGTGATA GACATGCACA ATCTGATGGC AAGAAGCTAT 
CTCATCATGA CGGACTCTGG AGGAATACAG GAAGAGGCAC CGGCCCTCGG AAGGCCGGTG 
ATCGTTCTGA GAAGGGAAAC TGAAAGGCCC GAAGCGATCG AAGCGGGTGT TGCCGTTTTG 
GGAGGAGTGG AGGAAGAAAG GATATTCGAA CTCGCAAAAA AGCTTCTTTT GGACAGAGAA 
GAATACGAAA AAATGGCGAA AGCCGTGAAT CCATTCGGGG ATGGCAGGGC TTCAGAGCGC 
ATAGTGAAGG CGATTCTCCA CGAATTCGGG CTTTCAGATC CACCGGAGGA ATTTGGCTGA
 
Protein sequence
MIRVLSVFGT RPEAIKMAPL VKKLEEEERN VESLVCVTAQ HRQMLDQVLE VFDIKPDFDL 
NIMKERQSLA DITVNALSGL YDLIEELKPD IVLVQGDTTT TFAGALAAFY HRIPVGHVEA 
GLRTNDRYSP FPEEINRRLT GVLSTLHFAP TKRNRENLLR ENVMGKIYVT GNTVIDALRY 
TVKESHVFEN PVLRNMDFSD GRYILLTSHR RENIGKPLEN ICKAVRRIVE EFEDVRVIYP 
VHMNPAVREI VFPMLENMER VFLIDPVNVI DMHNLMARSY LIMTDSGGIQ EEAPALGRPV 
IVLRRETERP EAIEAGVAVL GGVEEERIFE LAKKLLLDRE EYEKMAKAVN PFGDGRASER 
IVKAILHEFG LSDPPEEFG