| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1701 |
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| Symbol | |
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| ID | 5171439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1700689 |
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| End bp | 1701684 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640564227 |
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| Product | peptidase M42 family protein |
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| Protein accession | YP_001245282 |
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| Protein GI | 148270822 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1363] Cellulase M and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGAAC TGATCAGAAA GCTGACGGAA GCCTTCGGTC CGAGTGGACG GGAAGAAGAG
GTGAGAAGAA TCATCCTCGA AGAACTCGAA GGGTACATAG ATGGTCACAG AATCGATGGG
CTCGGCAATC TCATAGTTTG GAAAGGAAGC GGTGAGAAGA AGGTGATACT GGACGCTCAC
ATAGATGAGA TAGGTGTTGT TGTTACAAAC ATAGATGAAA AAGGATTTCT GACGATAGAA
CCCGTCGGTG GTGTCTCTCC GTACATGCTT CTTGGAAAAA GGATCAGGTT CGAAAACGGT
GTGGTAGGCG TTGTTGGTAT GGAAGGTGAA ACAACAGAAG AAAGGCAGGA GAATGTGAGA
AAGCTCTCGT TCGACAAGCT GTTCGTTGAC ATCGGTGCAA GTTCCCGGGA GGAAGCACAG
AAGATGTGCC CGATTGGAAG TTTCGGCGTC TACGACAGTG GATTCGTTGA AGTTTCCGGA
AAATACGTCT CGAAGGCGAT GGACGACAGG ATAGGATGCG CCGTAATCGT CGAAGTTTTC
AAAAGAATCA AACCCACTGT TACGCTCTAC GGTGTTTTCA GTGTTCAGGA AGAAGTGGGA
TTGGTTGGTG CCTCGGTGGC AGGCTACGGC ATATCAGCGG ATGAGGCCAT TGCGATCGAT
GTGACAGATT CGGCAGATAC ACCGAAGGCC ATAAAGAGAC ACGCTATGAG ACTCTCCGGT
GGTCCCGCTT TGAAAGTCAA AGACAGAGCC TCGATCAGCA GCAGACGCAT CCTCGAAAAT
CTGATAGAGA TCGCGGAAAA GTTCAGTATA AAGTATCAGA TGGAAGTTCT GACGTTCGGT
GGCACGAACG CCATGGGATA TCAACGAACA AGAGAAGGAA TTCCTTCCGC CACGGTGTCT
GTTCCCACAC GATACGTTCA TTCACCCAGT GAGATGATCG CACCGGATGA TGTTGAGGCA
ACGGTCGATC TTCTCATCAG GTATCTGGGG GCGTGA
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| Protein sequence | MKELIRKLTE AFGPSGREEE VRRIILEELE GYIDGHRIDG LGNLIVWKGS GEKKVILDAH
IDEIGVVVTN IDEKGFLTIE PVGGVSPYML LGKRIRFENG VVGVVGMEGE TTEERQENVR
KLSFDKLFVD IGASSREEAQ KMCPIGSFGV YDSGFVEVSG KYVSKAMDDR IGCAVIVEVF
KRIKPTVTLY GVFSVQEEVG LVGASVAGYG ISADEAIAID VTDSADTPKA IKRHAMRLSG
GPALKVKDRA SISSRRILEN LIEIAEKFSI KYQMEVLTFG GTNAMGYQRT REGIPSATVS
VPTRYVHSPS EMIAPDDVEA TVDLLIRYLG A
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