Gene Tpet_1699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1699 
Symbol 
ID5171445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp1699442 
End bp1699987 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content44% 
IMG OID640564225 
Producthelix-hairpin-helix repeat-containing competence protein ComEA 
Protein accessionYP_001245280 
Protein GI148270820 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACTCA AAAAGCAGCA TCAAAGAACA ATACTGTTCG TGGCACTCGT GTTCTTCATA 
TTGCTTGGAA TTGTTATGGA ACGAGAAACA AAAACAGAGG AGGACACAAC ACCCTCTCAG 
AAGGTTGTTG CTTTTCCGGT GGATCTGAAT ACCGCTTCTC TGGAAGATCT GATGTCGATT 
CCCGGAATCG GCCCTGTGAA GGCCCAGAGG ATCATCGATT ACAGAGAGTC ACATGGTGGG 
TTTTCGAGTG TGGAAGAATT GAAGAACGTC TCCGGGATCG GAGAGAAAAC TCTGGAGAAG 
ATTTCTGGAT ATGTGACCGT TGAGGGAGTT GAACAACATA TCAAAAGAGA AGTCACAAAA 
CTGAACGTAA ACACGGCTTC TGTTGAAGAA CTCGAAACCC TTCCCTACAT AGGTGAGATG 
AAGGCAAAAG CCATTGTCGA GTACCGTGAA AAAAACGGTC CTTTCTGTTC TCCCGAAGAT 
CTTCTGAACG TGCCTGGAAT AGGTGAAAAG ACACTGGAGA AAATAAGAGG AAAAATCACA 
TTTTGA
 
Protein sequence
MKLKKQHQRT ILFVALVFFI LLGIVMERET KTEEDTTPSQ KVVAFPVDLN TASLEDLMSI 
PGIGPVKAQR IIDYRESHGG FSSVEELKNV SGIGEKTLEK ISGYVTVEGV EQHIKREVTK 
LNVNTASVEE LETLPYIGEM KAKAIVEYRE KNGPFCSPED LLNVPGIGEK TLEKIRGKIT 
F