| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1689 |
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| Symbol | |
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| ID | 5170787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1690094 |
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| End bp | 1691785 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640564215 |
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| Product | Beta-glucuronidase |
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| Protein accession | YP_001245270 |
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| Protein GI | 148270810 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0566843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAAC CAAAGAACAC TCTTAAGAGA ATCGTACAAA ACCTGGATGG CTTCTGGGAT
TGTGAGATAA AAGAAGAGAA CAGACCCATA GCCGTTCCTG GAAGCTGGAA CGAGCAGTAC
CAGGATCTGT GCTACGAAGA AGGACCCTTC ACCTACAAAA CCACCTTCTA CGTTCCAGAG
GAACTTTCAC AAAAACACAT CAGACTTTAC TTTGCTGCCG TGAACACAGA CTGCGATGTC
TTCCTAAACG GAGAGAAAGT GGGAGAGAAT CACATTGGAT ACCTTCCCTT CGAAGTAGAT
GTGACAGGGA AAGTGAAACC AGGAGAGAAC GAATTCAAGG TGGTTGTTGA GAACAGGTTG
AAGGTGGGAG GATTTCCCTC GAAGGTTCCA GACAGAGGCA CTCACACTGT GGGATTCTTC
GGAAGTTTTC CACCTGCAAA CTTCGACTTC TTTCCCTACG GAGGAATCAT AAGACCTGTT
CTGATAGAAT TCACAGACCA CGCGAGGATA CTCGACATCT GGGTGGACAC GAGTGAATCC
GAACCGGAGA AGAAACTTGG AAGAGTGAAA GTGAAGGTAG AAGTCTCAGA GGAAGCGCTG
GGACAGGAGA TGACGATCAA ACTTGGAGAA GCTGAGAAAA AGATCAAAAC ATTCGACAGG
TTCGTTGAAG AAGAGTTCAT CCTCGAAAAC GCCAGATTTT GGAGCCTCGA AGATCCGTAT
CTTTATCCTC TAAAAGTGGA ACTCGAAAGG GACGAGTACA CTCTGGACAT CGGAATCAGA
ACGATCAGCT GGGACGAGAA AAAGCTCTAC CTGAACGGAA AACCCGTCTT TTTGAAAGGC
TTTGGAAAAC ACGAAGAATT TCCCGTTCTG GGACAGGGCA CTTTCTATCC TCTGATGATA
AAAGACTTCA ACCTTCTGAA GTGGATCAAC GCGAATTCCT TCAGGACCTC TCACTACCCT
TACAGTGAAG AGTGGCTGGA TCTTGCCGAC AGGCTGGGAA TCCTTGTGAT AGACGAAGCC
CCGCACGTTG GTATCACAAG GTACCACTAC AACCCCGAGA CTCAGAAGAT AGCCGAAGAC
AACATAAGAA GGATGATCGA CAGAGACAAA AACCATCCCA GTGTGATCAT GTGGAGTGTA
GCGAACGAAC CAGAATCCAA CCATCCAGAC GCGGAGGGTT TCTTCAAAGC CCTTTACGAG
ACCGCCAAAG AAATGGATCG AACACGTCCT GTGGTCATGG TGAGCATGAT GGACACGCCA
GACGAAAGAA CAAGAGATGT GGCACTGAAG TACTTCGACA TCGTCTGTGT GAACAGGTAC
TACGGCTGGT ACATCTATCA GGGAAGGATA GAAGAAGGAC TTCAGGCTCT GGAAAAAGAC
ATAGAAGAAC TCTACGCAAG ACACAGAAAG CCCATCTTTG TCACGGAGTT CGGTGCAGAC
GCGATAGCCG GTATCCACTA CGACCCACCT CAGATGTTCT CCGAGGAGTA CCAGGCAGAG
CTCGTTGAAA AGACGATCAG GCTTCTTTTG AAAAAAGACT TCGTCATTGG AACACACGTG
TGGGCCTTCG CGGACTTCAA AACCCCTCAA AATGTGAGAA GGCCCATCCT CAACTACAAG
GGTGTCTTCA CAAGAGACAG ACAACCCAAA CTCGTTGCTC ATGTGCTGAG AAAACTGTGG
AGTGAGGTTT GA
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| Protein sequence | MLKPKNTLKR IVQNLDGFWD CEIKEENRPI AVPGSWNEQY QDLCYEEGPF TYKTTFYVPE
ELSQKHIRLY FAAVNTDCDV FLNGEKVGEN HIGYLPFEVD VTGKVKPGEN EFKVVVENRL
KVGGFPSKVP DRGTHTVGFF GSFPPANFDF FPYGGIIRPV LIEFTDHARI LDIWVDTSES
EPEKKLGRVK VKVEVSEEAL GQEMTIKLGE AEKKIKTFDR FVEEEFILEN ARFWSLEDPY
LYPLKVELER DEYTLDIGIR TISWDEKKLY LNGKPVFLKG FGKHEEFPVL GQGTFYPLMI
KDFNLLKWIN ANSFRTSHYP YSEEWLDLAD RLGILVIDEA PHVGITRYHY NPETQKIAED
NIRRMIDRDK NHPSVIMWSV ANEPESNHPD AEGFFKALYE TAKEMDRTRP VVMVSMMDTP
DERTRDVALK YFDIVCVNRY YGWYIYQGRI EEGLQALEKD IEELYARHRK PIFVTEFGAD
AIAGIHYDPP QMFSEEYQAE LVEKTIRLLL KKDFVIGTHV WAFADFKTPQ NVRRPILNYK
GVFTRDRQPK LVAHVLRKLW SEV
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