Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1686 |
Symbol | |
ID | 5171382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1685805 |
End bp | 1686827 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640564212 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001245267 |
Protein GI | 148270807 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.62904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCTTC TTGAGGTGAA GAATCTGAAG AAGTACTTTC CCATCATGAA GCGTGGCTTT AGAAGGAAGG TTGTTGGATA TTTGAAGGCG GTGGATGGTA TTTCTTTCCA CATAGAAGAG GGGGAAACCC TCGGGCTTGT TGGAGAGAGT GGTTGTGGTA AGACCACAAC GGCAAAACTC ATCATGAGAG GGATCGAGCC AACAGAGGGA AAGATTATTT TGAGTATGAA CGGAGAGAAA GTCGATATCA CAAAGCTTTC TGAGAGAGAA CTCAGGGAAA AGGGTGTGAG AAGGTTCGTT CAGATGATCT TCCAGGATCC TTATTCTTCT TTGAATCCAA GAATGACCGT GAGGGATATC ATAGCAGAAC CCCTTGTTGT AAACAAACTG GTGAAGTCGA AGGAGGAGAT AGACCAGATC GTATCAGATC TTTTGAGGGC TGTCGGCCTG AGGCCAGAGT ACATGCAAAG GTATCCCCAC GCCTTCTCGG GTGGGCAGAG ACAGAGAATC GCCATCGCAC GTGCGATCGC TTTGAAGCCA AAGCTTGTTC TGTGTGATGA GCCAACTTCC GCTCTGGATG TGTCCGTTCA GGCACAGATC ATAAATCTTC TCAAGGACCT TCAAAAAGAG TACAATCTCA CCTATCTGTT CATCTCACAC GATCTTGGTG TGGTGGAACA CATCACAAAC AGGGTGGCCG TGATGTACGT GGGAAGGATC GTGGAACTTG CAGAGACTGA AGATCTCTTT TCTTCTCCAA AGCACCCCTA CACGGAGGCT CTCCTTTCTG CCGTTCCAAA GCCAGATCCA AAAAGAAAGA GAAAGAAGGT GCATCTCACA GGTGAGGTCC CGGACCCATC GAATCCACCC TCTGGTTGTT ATTTCCATCC AAGGTGTCCT TACGCTAAAG CCATCTGTAA GGAGGTGTAC CCAGAGCTCA GAAACGTCGG CTCTGACCAA AATCCTCACT TCGTGGCGTG TCACTTTGCT GAGGAACTGG AGTTAATGGG GGTGAAAGTA TGA
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Protein sequence | MALLEVKNLK KYFPIMKRGF RRKVVGYLKA VDGISFHIEE GETLGLVGES GCGKTTTAKL IMRGIEPTEG KIILSMNGEK VDITKLSERE LREKGVRRFV QMIFQDPYSS LNPRMTVRDI IAEPLVVNKL VKSKEEIDQI VSDLLRAVGL RPEYMQRYPH AFSGGQRQRI AIARAIALKP KLVLCDEPTS ALDVSVQAQI INLLKDLQKE YNLTYLFISH DLGVVEHITN RVAVMYVGRI VELAETEDLF SSPKHPYTEA LLSAVPKPDP KRKRKKVHLT GEVPDPSNPP SGCYFHPRCP YAKAICKEVY PELRNVGSDQ NPHFVACHFA EELELMGVKV
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