Gene Tpet_1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1686 
Symbol 
ID5171382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1685805 
End bp1686827 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content48% 
IMG OID640564212 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001245267 
Protein GI148270807 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.62904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTTC TTGAGGTGAA GAATCTGAAG AAGTACTTTC CCATCATGAA GCGTGGCTTT 
AGAAGGAAGG TTGTTGGATA TTTGAAGGCG GTGGATGGTA TTTCTTTCCA CATAGAAGAG
GGGGAAACCC TCGGGCTTGT TGGAGAGAGT GGTTGTGGTA AGACCACAAC GGCAAAACTC
ATCATGAGAG GGATCGAGCC AACAGAGGGA AAGATTATTT TGAGTATGAA CGGAGAGAAA
GTCGATATCA CAAAGCTTTC TGAGAGAGAA CTCAGGGAAA AGGGTGTGAG AAGGTTCGTT
CAGATGATCT TCCAGGATCC TTATTCTTCT TTGAATCCAA GAATGACCGT GAGGGATATC
ATAGCAGAAC CCCTTGTTGT AAACAAACTG GTGAAGTCGA AGGAGGAGAT AGACCAGATC
GTATCAGATC TTTTGAGGGC TGTCGGCCTG AGGCCAGAGT ACATGCAAAG GTATCCCCAC
GCCTTCTCGG GTGGGCAGAG ACAGAGAATC GCCATCGCAC GTGCGATCGC TTTGAAGCCA
AAGCTTGTTC TGTGTGATGA GCCAACTTCC GCTCTGGATG TGTCCGTTCA GGCACAGATC
ATAAATCTTC TCAAGGACCT TCAAAAAGAG TACAATCTCA CCTATCTGTT CATCTCACAC
GATCTTGGTG TGGTGGAACA CATCACAAAC AGGGTGGCCG TGATGTACGT GGGAAGGATC
GTGGAACTTG CAGAGACTGA AGATCTCTTT TCTTCTCCAA AGCACCCCTA CACGGAGGCT
CTCCTTTCTG CCGTTCCAAA GCCAGATCCA AAAAGAAAGA GAAAGAAGGT GCATCTCACA
GGTGAGGTCC CGGACCCATC GAATCCACCC TCTGGTTGTT ATTTCCATCC AAGGTGTCCT
TACGCTAAAG CCATCTGTAA GGAGGTGTAC CCAGAGCTCA GAAACGTCGG CTCTGACCAA
AATCCTCACT TCGTGGCGTG TCACTTTGCT GAGGAACTGG AGTTAATGGG GGTGAAAGTA
TGA
 
Protein sequence
MALLEVKNLK KYFPIMKRGF RRKVVGYLKA VDGISFHIEE GETLGLVGES GCGKTTTAKL 
IMRGIEPTEG KIILSMNGEK VDITKLSERE LREKGVRRFV QMIFQDPYSS LNPRMTVRDI
IAEPLVVNKL VKSKEEIDQI VSDLLRAVGL RPEYMQRYPH AFSGGQRQRI AIARAIALKP
KLVLCDEPTS ALDVSVQAQI INLLKDLQKE YNLTYLFISH DLGVVEHITN RVAVMYVGRI
VELAETEDLF SSPKHPYTEA LLSAVPKPDP KRKRKKVHLT GEVPDPSNPP SGCYFHPRCP
YAKAICKEVY PELRNVGSDQ NPHFVACHFA EELELMGVKV