| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1682 |
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| Symbol | |
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| ID | 5170532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1680090 |
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| End bp | 1682720 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640564208 |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_001245263 |
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| Protein GI | 148270803 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000411087 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACAGG CCTGTGATCT TCGCTGTGAA TATTTGACGT CTCCTGTCCT TGGACTCGAT
GTGATTCCTC GATTTTCTTG GAGATTAAAG GGTAATGGAA AGAAACAAAC ACGATACAAA
ATTATCGTTT CGGACAATTT CGATGATATC GAAAGAGGAA TAGGAAATGT GTGGGAGAGC
GAAAAAGATT CTTCAAAAAA CCTGAACATA GAATATGAAG GGCCAAAATT GAAAGCTTAC
AAGGGCTACT ATTGGCGCGT GAAACTTTGG GATGAAAAAG AAAATGGACC GTGGAGTGAG
ACAGCTTACT TCGAAATGGG CCCTTTAGAG GATTGGAGAG GAAAATGGAT AACCATGCCT
TCTCCGCTCT CTTTTAAGGA TCCAGCCCAT CGCCATGAAC TCTTCTACGC TATGTACTTT
CGAAAGGAGT TTCTCTTAAA CAAAGAGGTA GAAAAAGCAC GGGTTTATGT GAGCGGGCTG
GGAGTCTATG AACTCCATTT GAACGGAAAA AGAGTGGGAA ACAATGTTCT CGATCCTGCA
CCAACGGATT ACAACAAGGT AGCACTCTAT TCAACATACG ATGTCACACA ATATCTAACA
ACGGGAAAAA ATACAATAGG TGTGATTCTT GGTAACGGCC GCCATATCAG AGATTATGGG
TATTCAAAAC CAAAACTTTA TCTTCAACTG CTTGTGTTCT ACAAAGATGG ATCGCGGGAA
TTCATTTGCT CCGACGAAAC ATGGAAGGTT TCACATGGAC CTCTGAAGGA AAATGGCATC
TATTTTGGCG AAGTCTACGA TGCCCGCGAC GAAATATCTG GATGGGATTC ACCCGGTTTC
GACGATAGGA ACTGGTCAGA AGTAGAAATC GTAGAAGGTC CTTCTCTGAA AGCACAACTG
ATTCCTGTCA TACGTGTTTG TGAGGTTATT AAACCAAAGA GGTTGTGGTT GTCTTCCAGA
GGAACTTTCA TAGTTGATTT TGGCAAAAAT ATTTCCGGGT GGGTGAAGCT GAGAGTAAAT
AACGGTAAAA GAGGGGAGAA AATTATCATA CGCTATGCGG AAGTACTGGA TCCCTCCATG
GATCGGCTGG ATACGAGAAA TCTTCGTCTA GCACGTGCTA CAGACGAATA CATTCTGAAG
GGACAGGGAG TGGAAATCTA CGAACCAAGA TTCACATACC ATGGGTTTCG TTATGTCGAA
GTGGAAGACT ATCCTGGCAC TTTAACCTCC GATAACATAG AAGCAATGTT TGTCCACACA
GATGTTGAAA AAGTTGGAGA TTTTGCCTGC TCGAGTGAAC TTTTGAACAA AATCCACTCA
TGTGTTGTGA ACAGTCAGTT AGCTAACCTG ATGGGAATTC CTACAGATTG CCCCCAGAGA
GATGAAAGAA TGGGATGGTT GGGTGATGCC CAATTAACGG TTGAAGAGGC GATGTACAAC
TTCGACATGG CAGCTTTCTA CACGAAATAT CTCATGGACA TAAAGCTTTC CCAGAAAGAA
GATGGAAGTA TATCAGATGT TGCTCCTCCC TACTGGAAGA GATACCCGTC AGATCCAGCT
TGGGGAACCG CCTATGCGAC GATTTTGTGG TATCTCTATT TCTTCTATGA AGACAGAAGA
GTACTGGAAG AACACTATGA TTCGCTGAAA CGTTACGTAG AGTTTCTCAG AAAGAATTCC
CCTAATCATT TAACAAAATT AGGACAGCAT GGTGATTGGT GTCCTCCAGG TGATAAATTC
CCAAAGCGCA CTCCTTTGAT TCTAACTTCC ACATGGTATT ACTATCACGA TACCCTCATT
TTGAGCGAGA TAGCGAAAAT ACTCGGAAAA AAGGAAGACG AACATGAGTA TAGAAAACTT
GCCGGAGAAA TAAAAGAAGC CTTCAACCGT CATTTTCTCA GGAAAGTTGA GGATCACACG
GGTCGGATTG TGTGCTTCTA CAGAGGAATA AAGTTGAGCC CCAAAGATAG AATTCCCACC
ACTCAGACGT GTAATGTTCT GCCTCTCTGG AACAAGATGG TTCCGGAAGA GTGTAGAGAG
GATGTGTTCA AAGTCCTTGA GAGACTGATA GAAGTGGATA ACGATACGCA TTTTGACACC
GGAATCGTGG GTACTCGTTA CATACTCGAG GTTTTATCGG AAAATGGCAG GAAAGACCTT
GCATTGAAAC TTCTTTTGAA AGAAGATTAT CCAAGCTTTG GCTACATGAT AAAGAACGGT
GCAACAACAC TGTGGGAGAG ATGGGAGAAG CTGGAAGGTA CTGGCATGAA TTCACATAAT
CATGTCATGC TGGGTAGCGT CGACACATGG TTCTATAAGT ATCTTTCGGG AATAAAACCG
GTTGCTCCCG GTTGGAAGAA GATAAGGATA GAACCATACT TCGCTGATCA AATAGATTTC
GTTTCGGCCA AAATAAAAAC CCCAAATGGA TCACTTGAGG TTAGTTGGAA AAAGCAGAAT
AAAGAATATG AAATCCAGAT TATTATACCG GTGAATACGG TTGGTATTTT CGCTGTTCCG
GAAAGTTTCA AAGTATCTGC AATAAACAGC AAACAAGTGA GTTATCCTTC TGAGTTTGAA
CTTGAACCAG GTGCCTACAA CATCGTTCTC GAAAGGGTGA GAGAATGTTA G
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| Protein sequence | MIQACDLRCE YLTSPVLGLD VIPRFSWRLK GNGKKQTRYK IIVSDNFDDI ERGIGNVWES
EKDSSKNLNI EYEGPKLKAY KGYYWRVKLW DEKENGPWSE TAYFEMGPLE DWRGKWITMP
SPLSFKDPAH RHELFYAMYF RKEFLLNKEV EKARVYVSGL GVYELHLNGK RVGNNVLDPA
PTDYNKVALY STYDVTQYLT TGKNTIGVIL GNGRHIRDYG YSKPKLYLQL LVFYKDGSRE
FICSDETWKV SHGPLKENGI YFGEVYDARD EISGWDSPGF DDRNWSEVEI VEGPSLKAQL
IPVIRVCEVI KPKRLWLSSR GTFIVDFGKN ISGWVKLRVN NGKRGEKIII RYAEVLDPSM
DRLDTRNLRL ARATDEYILK GQGVEIYEPR FTYHGFRYVE VEDYPGTLTS DNIEAMFVHT
DVEKVGDFAC SSELLNKIHS CVVNSQLANL MGIPTDCPQR DERMGWLGDA QLTVEEAMYN
FDMAAFYTKY LMDIKLSQKE DGSISDVAPP YWKRYPSDPA WGTAYATILW YLYFFYEDRR
VLEEHYDSLK RYVEFLRKNS PNHLTKLGQH GDWCPPGDKF PKRTPLILTS TWYYYHDTLI
LSEIAKILGK KEDEHEYRKL AGEIKEAFNR HFLRKVEDHT GRIVCFYRGI KLSPKDRIPT
TQTCNVLPLW NKMVPEECRE DVFKVLERLI EVDNDTHFDT GIVGTRYILE VLSENGRKDL
ALKLLLKEDY PSFGYMIKNG ATTLWERWEK LEGTGMNSHN HVMLGSVDTW FYKYLSGIKP
VAPGWKKIRI EPYFADQIDF VSAKIKTPNG SLEVSWKKQN KEYEIQIIIP VNTVGIFAVP
ESFKVSAINS KQVSYPSEFE LEPGAYNIVL ERVREC
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