| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1676 |
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| Symbol | |
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| ID | 5170031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1671301 |
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| End bp | 1672701 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640564202 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001245257 |
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| Protein GI | 148270797 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00400628 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTACCA TTGTATTTGT AGGAGCGGGG AGCGTAAGGT ACACGATCAA GCTGGTAGGG
GACCTGGCGA AGACACCGGA GCTGTATGGG TCAAGACTGG TATTGATGGA CATCGACGAA
GAAAGGTTGA AAGCAACGTA CGTTCTCGTC ACAAAGTACC TCAGAGAACT GAATGCAGAG
TACACAGTGG AACAGACAAC AAGCCTTGAG AAAGCACTTG AAGAGGCAGA CTTTGTCATC
AACACAGCCC TCTACAGGGC ACCAGGACAC GAAGATGGAT ACGTACACTA CGAGATCATG
AGGGGAGTAG GAGAGAGACA TGGCTACTAC AGAGGGATAG ACAGCCAGGA GCTGAACATG
GTCTCGGACT ACTACACACT CAGCAACTAC AACCACCTGA AGATGAGCCT TGATATAGCA
AAGGCAGTGG AGAAGATATC ACCGAATGCG TGGATACTGC AGACGGCCAA TCCCGTTTTT
GAGATCACGC AGCTTGTGAA GAGACTTACG AAAGCGAAGA TAGTGGGTTT CTGCCACGGA
TATGCGCACG TGTTCCACCT TGCGAAGGTA CTCGGTGTGG AGCCAGAAGA ATTAGACTGG
CAAGTAGCAG GGGTGAACCA TGCGATATGG ATGAACAGGT TCAGGTGCAG AGGGGAGGAT
CTCTATCCGA AGCTGGACGA ATGGATAGAG AAGAACGCGT CGAAGTGGGA GCCGAAGAAT
CCATGGGATG TGGACTTTTC ACCTGCAGCG ATAGACATGT ACAGGTTCTA CGGGATGTAC
CCGATAGGGG ACACGGTGAG GAGTGGGACA TGGAAATACC ACTACGATCT TGAGACAAAG
AAGAGATGGT ACGGGAAGTT TGGAGGGATA GACAACGAAG TGGAGAGGCC GAAGTTCTAC
GAGAGTTTGA GAAAGCAGAG GAAGAGACTG ATGGAACTTG CGAAAGAAGT GGAAAAAGAT
CCAACGATAG AGCTGACGAA GGTGTGGCCT GAGGTGTTCA CAACAGGCAG TGAGAGTGTA
GAGCAGCACA TACCGTTCAT AAACGCGCTT GTGAACAACA AGAAAGCGAG GCTTGTGTTG
AACATAGAGA ACAGAGGGGT GATAAAGGGG ATACCGGACG ATGTGGTGGT GGAGGTGCCG
GTGGTAGTTG ATAAAGAAGG GATACATCCG GAGAAGATAG AGCCTGATCT TACAGACAGG
ATCAAGAAGT TCTATCTTCT TCCAAGGATA CTCAGGATGG AGTGGGCACT TGAGGCGTTC
ATATCTGGTG ACAGGAGGGT TCTGGAGGAG ATCCTCGTCA GGGATCCAAG AACCAGATCT
TACGAACAGG CTGTTGCTGT CATCGATGAT ATCCTTAACC TCCCCTTCAA CGAGGAAATG
AAGAAGCACT ACGGCGGTTG A
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| Protein sequence | MPTIVFVGAG SVRYTIKLVG DLAKTPELYG SRLVLMDIDE ERLKATYVLV TKYLRELNAE
YTVEQTTSLE KALEEADFVI NTALYRAPGH EDGYVHYEIM RGVGERHGYY RGIDSQELNM
VSDYYTLSNY NHLKMSLDIA KAVEKISPNA WILQTANPVF EITQLVKRLT KAKIVGFCHG
YAHVFHLAKV LGVEPEELDW QVAGVNHAIW MNRFRCRGED LYPKLDEWIE KNASKWEPKN
PWDVDFSPAA IDMYRFYGMY PIGDTVRSGT WKYHYDLETK KRWYGKFGGI DNEVERPKFY
ESLRKQRKRL MELAKEVEKD PTIELTKVWP EVFTTGSESV EQHIPFINAL VNNKKARLVL
NIENRGVIKG IPDDVVVEVP VVVDKEGIHP EKIEPDLTDR IKKFYLLPRI LRMEWALEAF
ISGDRRVLEE ILVRDPRTRS YEQAVAVIDD ILNLPFNEEM KKHYGG
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