| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1657 |
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| Symbol | |
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| ID | 5171461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1652596 |
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| End bp | 1653264 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640564183 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001245238 |
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| Protein GI | 148270778 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000107341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCTTCCTC TTTACGACAT TCTCCCAAGC AGAAAGAAAC CTTACGTGAC GATGGCTTTG
ATTTTGATAA ACGTGGTTGT TTTCGTGTAT GAACTCATGT TGAACGATAG AGAACTTCTC
CTGTTCATGT ACAGGTACGG TCTTGTGCCG GCTCGTTACA CAGTTGAGAG GATAAAAGAA
ACACTTGGCT TTTCTCTTCT TCCTTTTATA ACCCACATGT TCCTGCACGG AGGATTCTGG
CACATCCTGG GTAACATGTG GTTCCTCTGG ATATTCGGAG ACAACACAGA AGACGAGATG
GGACACTTTG GCTACACTCT GTTTTATCTA TCTGCCGGCA TTTTTGCCGC ACTCGCACAG
TTCGTTTTTA CACTTCATTC AACAACTCCC ATGGTTGGTG CATCCGGTGC GGTGTCCGGA
GTTATGGGAG CTTATTTCGT GCTGTTTCCG TACTCGAGAA TAGTGACTTT GTTTCCGTTC
TTCTTCTTCC TCACACTCGT GGAAATACCC GCGTTCTACT ATCTGATGAT CTGGTTCTTT
ATCCAAGTTC TGAACGGCCT TGTTGGATCC TACGGAATAG CGTGGTGGGC ACACATAGGT
GGATTTGTCT ACGGGATGAT TTGGGGATAT ATTTTAAGGA TGAGAAGGAT TCACAGGTAC
AGATATTGA
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| Protein sequence | MLPLYDILPS RKKPYVTMAL ILINVVVFVY ELMLNDRELL LFMYRYGLVP ARYTVERIKE
TLGFSLLPFI THMFLHGGFW HILGNMWFLW IFGDNTEDEM GHFGYTLFYL SAGIFAALAQ
FVFTLHSTTP MVGASGAVSG VMGAYFVLFP YSRIVTLFPF FFFLTLVEIP AFYYLMIWFF
IQVLNGLVGS YGIAWWAHIG GFVYGMIWGY ILRMRRIHRY RY
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