| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1649 |
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| Symbol | |
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| ID | 5170169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1644348 |
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| End bp | 1645667 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640564175 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001245230 |
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| Protein GI | 148270770 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGAGC AGGTGAAGAT ACAAAAAATG GTCAACGGAG GCTACGGCCT TGCCCATCTT
TCGAACGGCA AGGTGGTTCT CGTCGAAGGA GCGTATCCCG GTGAGGAAGT TCTGATAAAG
ACTTACAGAG AGAAAAGGGA TTTTTCTTTT GGAAGGGTAG TTTCCCTTCT GAAAGAATCT
GAAGATCGAA CGAAACCACC CTGCAGGTAC TTCGGAAGAT GCGGTGGCTG TCACTGGATG
GATGTGAAAT ATGAAACCCA GCTCCGATAC AAAAAGGAGG TATTGCTTGA TCTTTTCGAA
CGCTCAAATC TAAAGGCAGA AGTGGAAGAT GTGGAACCGA GTGACCTTGT TTTTCATTAC
AGGACGAAAA TGGAGTTTCA TTTCCAGGGA AGAAAATTAG GGTTGAAAAA GAGAGACTCC
GATTTTGTGA TCGATATAAA AGACTGTGAA GTGGCACCGG AAGGCACGGG TGAGATTCTG
AACACCGTCA AAGAGGCCGT TCAAGTACTC AACGTTCCTG TTTACAACTG GGAAACGAAA
AAGGGAGTAC TCAAGCACCT CGTGATCAGG TACGCATTCA GCACGGACCA GTTCATGGTG
ATTTTCGTGA CGAAGACAGA ATCCTTTCCC TGGGAAAAGG ATCTGGTTCG AGCTGTGTTG
AAGAGATTTC CAAAGATCCA CTCCATCATC CATGTGATGA ATTCGAAAGA CTCTGTGGTT
CTGAGGGGAC CGTACAGAAC CCTCTATGGT GAGGGTGTAA TTGTAGAAGA GTTCGACTGG
GAGAGGTTTC AAATTCCACC GACCGCCTTC TTTCAGAGTA ACTACTCCGT CACATCCAAA
CTGATAGATC ATGTGTACAG GGAACTGGCA CTTCAGGGTA ACGAAGTATT GCTCGATCTG
TACGCGGGTA TTGGAACGTT TTCTGTGAGG GCTTCCTTCT CAGCAGCGAG GGTGATCTCT
GTTGAATCCA GCAGGGTCGC TGTGAAGGCT GGAAAGGCTA ACGCGAACAT AAACAGCAGA
AGGAACATAG AATACGTGGA ACAGGATGTA CTGGATTTCC TGAAAAACTA CAGCGGAAGG
GCAGACAGAA TAATCCTGGA CCCACCGAGA TCAGGTGCGG GTCCAGAAGT GGTGAAAGAA
ATAGTGAGAC TTTCACCCGA AAGGATCGTT TACGTTTCCT GTGAGCCTTC CACTCTGGCG
AGGGATCTCA AGGTGTTGGT GGAGAACGGC TACTCTATTC TCAGGGTGAA GCCCTTCGAC
ATGTTTCCCC AGACTTACCA TGTGGAAACT GCTGTGACTC TCGTGAAAGG GGATCGATGA
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| Protein sequence | MLEQVKIQKM VNGGYGLAHL SNGKVVLVEG AYPGEEVLIK TYREKRDFSF GRVVSLLKES
EDRTKPPCRY FGRCGGCHWM DVKYETQLRY KKEVLLDLFE RSNLKAEVED VEPSDLVFHY
RTKMEFHFQG RKLGLKKRDS DFVIDIKDCE VAPEGTGEIL NTVKEAVQVL NVPVYNWETK
KGVLKHLVIR YAFSTDQFMV IFVTKTESFP WEKDLVRAVL KRFPKIHSII HVMNSKDSVV
LRGPYRTLYG EGVIVEEFDW ERFQIPPTAF FQSNYSVTSK LIDHVYRELA LQGNEVLLDL
YAGIGTFSVR ASFSAARVIS VESSRVAVKA GKANANINSR RNIEYVEQDV LDFLKNYSGR
ADRIILDPPR SGAGPEVVKE IVRLSPERIV YVSCEPSTLA RDLKVLVENG YSILRVKPFD
MFPQTYHVET AVTLVKGDR
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