| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1641 |
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| Symbol | rnc |
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| ID | 5170308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1636949 |
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| End bp | 1637671 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640564168 |
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| Product | ribonuclease III |
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| Protein accession | YP_001245223 |
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| Protein GI | 148270763 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAACGAGA GTGAGAGAAA GATCGTGGAG GAGTTTCAGA AAAAAACAGG AATCAACTTC
AAGAACGAAG AACTTCTCTT TCGGGCTCTA TGCCACAGTT CTTACGCGAA CGAGCAGAAT
CAAGCGGGGA GGAAAGACGT GGAATCGAAC GAAAAGCTGG AGTTTCTGGG GGACGCCGTT
CTGGAGCTCT TCGTGTGTGA AATACTCTAC AAGAAATATC CGGAAGCGGA AGTGGGAGAC
CTGGCCCGAG CGAAATCCGC CGCGGCGAGT GAGGAAGTGC TCGCTATGGT TTCCAGGGAG
CTGAACCTTG GTAAATTTCT GTTTCTCGGA AAAGGAGAGG AAAAAACCGG AGGACGTGAT
AGAGATTCCA TACTTGCCGA CGCGTTTGAA GCGCTTCTGG CCGCCATATA CCTCGATCAA
GGCTATCATA AGATAAAGGA GCTCTTTGAA GAGGAATTTG AGCTCTACAT AGAAAAGATC
ATGAGGGGTG AAATGCTCTT CGACTACAAA ACGGCTCTCC AGGAAATAGT CCAGAGCGAA
CACAAAGTGC CTCCGGAATA CGTACTGGTG AGAACGGAAA AAAACGACGG TGACAGGATT
TTCGTTGTGG AAGTGAGAGT AGATGGAAAG TCTATCGCCA TGGGCAGAGG CAGAACCAAG
AAGGAAGCCG AAAAGGAGGC CGCAAGAATC GCCTACGAAA AGCTTTTGAA GGAGAGATCA
TGA
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| Protein sequence | MNESERKIVE EFQKKTGINF KNEELLFRAL CHSSYANEQN QAGRKDVESN EKLEFLGDAV
LELFVCEILY KKYPEAEVGD LARAKSAAAS EEVLAMVSRE LNLGKFLFLG KGEEKTGGRD
RDSILADAFE ALLAAIYLDQ GYHKIKELFE EEFELYIEKI MRGEMLFDYK TALQEIVQSE
HKVPPEYVLV RTEKNDGDRI FVVEVRVDGK SIAMGRGRTK KEAEKEAARI AYEKLLKERS
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