| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1609 |
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| Symbol | |
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| ID | 5171429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1609360 |
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| End bp | 1610259 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640564135 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001245191 |
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| Protein GI | 148270731 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00171183 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTATTCT TCCTCCAGAA TCTCTTCAAC GGAATCATGC TTGGAGGTCT GTACGCACTG
ATAGCGATCG GCTACACCAT GGTTTACGGA ATTCTGAGGC TCATCAATTT TGCCCATGGC
GATGTTATGA TGATGGGTGT TTACTTTGCC TTCTACGCTG CTACTCTTCT TTCTTTGAAT
CCGCTTTTTT CTGCCATCGT AGCAATCCTT GGGGCAGCGG TACTTGGTTT TCTCATAGAC
AGGGTCGCTT ACAAACCTCT GAGAAATGCT CCCAGAATTT CCGCTCTTAT CACCGCTATC
GGGGTTTCTT TCTTTCTTGA GAGTCTCGCG GTGGTCGTGT TCGGTGCCAT TCCCAAGTCT
TTCTTGAATG TTTTCAAAGA CAGAACCATA CTGAACAAGG TTCTGACATT AGCAGGGGCC
AGAATACCAC TTCTCACGTT CCTCGTGATC TTCATCACCA TCGTCATCCT GATAGTGTTG
TTTTTCATCG TTTACAGGAC AAAGATCGGA ATGGCTATGA GGGCGATTTC CATGGACATA
CCAACAACTG CTCTCATGGG GGTCAACGTG GATGCCGTCA TCGGTTTTAC GTTTGCCCTC
GGTTCGGCAC TCGCAGCGGC AAGTGGTATC ATGTGGGCAA TGAGATTTCC AAACGTGCAC
CCTTACATGG GTTTCATGCC GGGTCTCAAG GCTTTCATTG CGGCTGTGTT TGGAGGAATA
GGTTCAATTC CCGGAGCTGT TCTCGGTGGT GTTCTTCTCG GTCTCATTGA GATATTCCTT
GCGGCTTATT TTCCAGCCGT TATGGGTTAC AGAGACGCCT TTGCTTTCAT CATCCTGATC
ATCATACTGC TCGTCAAACC TTCGGGACTT CTCGGTAAAA AAATCGTGGA AAAGGTGTGA
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| Protein sequence | MVFFLQNLFN GIMLGGLYAL IAIGYTMVYG ILRLINFAHG DVMMMGVYFA FYAATLLSLN
PLFSAIVAIL GAAVLGFLID RVAYKPLRNA PRISALITAI GVSFFLESLA VVVFGAIPKS
FLNVFKDRTI LNKVLTLAGA RIPLLTFLVI FITIVILIVL FFIVYRTKIG MAMRAISMDI
PTTALMGVNV DAVIGFTFAL GSALAAASGI MWAMRFPNVH PYMGFMPGLK AFIAAVFGGI
GSIPGAVLGG VLLGLIEIFL AAYFPAVMGY RDAFAFIILI IILLVKPSGL LGKKIVEKV
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