Gene Tpet_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1606 
Symbol 
ID5170846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1606721 
End bp1607440 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content50% 
IMG OID640564132 
ProductABC transporter related 
Protein accessionYP_001245188 
Protein GI148270728 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTGACA TCGTCCTTGA AGTCCAGTCT CTCCACGTTT ATTACGGTGC GATCCACGCC 
ATCAAGGGAA TAGACCTGAA AGTCCCGAGA GGTCAGATCG TAACGCTGAT CGGAGCAAAC
GGTGCGGGAA AGACCACAAC ACTCTCCGCG ATAGCAGGAC TCGTGAGGGC ACAAAAAGGA
GAGATCATCT TCAACGACCA GGACATAACG AACAAACCTG CTCACATGAT AAACAAAATG
GGAATAGCCC TGGTTCCCGA AGGAAGAAGG ATCTTTCCAG AACTCACCGT CTACGAGAAT
CTCATGATGG GAGCGTACAA CCGGAAAGAC AAAGAGGGAA TAAAACGTGA CCTGGAATGG
ATCTTCTCGC TCTTCCCGAG GTTGAAAGAG AGATTGAAAC AGCTTGGGGG CACTCTTTCC
GGTGGAGAAC AGCAGATGCT CGCAATTGGA AGGGCTTTGA TGAGCAGGCC AAAGCTTCTG
ATGATGGACG AACCTTCTCT GGGTCTTGCC CCCATTTTGG TCTCCGAAGT TTTCGAGGTC
ATCCAGAAGA TCAACCAGGA GGGGACCACC ATTCTCCTGG TGGAACAGAA CGCCCTCGGC
GCTTTGAAGG TTGCCCACTA CGGTTATGTT CTCGAAACTG GACAGATCGT TCTCGAAGGA
AAAGCCAGCG ACCTTCTGAA TAACGAAATG GTCAGAAAGG CCTATCTTGG TGTTGCATAA
 
Protein sequence
MSDIVLEVQS LHVYYGAIHA IKGIDLKVPR GQIVTLIGAN GAGKTTTLSA IAGLVRAQKG 
EIIFNDQDIT NKPAHMINKM GIALVPEGRR IFPELTVYEN LMMGAYNRKD KEGIKRDLEW
IFSLFPRLKE RLKQLGGTLS GGEQQMLAIG RALMSRPKLL MMDEPSLGLA PILVSEVFEV
IQKINQEGTT ILLVEQNALG ALKVAHYGYV LETGQIVLEG KASDLLNNEM VRKAYLGVA