Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1606 |
Symbol | |
ID | 5170846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1606721 |
End bp | 1607440 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640564132 |
Product | ABC transporter related |
Protein accession | YP_001245188 |
Protein GI | 148270728 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTGACA TCGTCCTTGA AGTCCAGTCT CTCCACGTTT ATTACGGTGC GATCCACGCC ATCAAGGGAA TAGACCTGAA AGTCCCGAGA GGTCAGATCG TAACGCTGAT CGGAGCAAAC GGTGCGGGAA AGACCACAAC ACTCTCCGCG ATAGCAGGAC TCGTGAGGGC ACAAAAAGGA GAGATCATCT TCAACGACCA GGACATAACG AACAAACCTG CTCACATGAT AAACAAAATG GGAATAGCCC TGGTTCCCGA AGGAAGAAGG ATCTTTCCAG AACTCACCGT CTACGAGAAT CTCATGATGG GAGCGTACAA CCGGAAAGAC AAAGAGGGAA TAAAACGTGA CCTGGAATGG ATCTTCTCGC TCTTCCCGAG GTTGAAAGAG AGATTGAAAC AGCTTGGGGG CACTCTTTCC GGTGGAGAAC AGCAGATGCT CGCAATTGGA AGGGCTTTGA TGAGCAGGCC AAAGCTTCTG ATGATGGACG AACCTTCTCT GGGTCTTGCC CCCATTTTGG TCTCCGAAGT TTTCGAGGTC ATCCAGAAGA TCAACCAGGA GGGGACCACC ATTCTCCTGG TGGAACAGAA CGCCCTCGGC GCTTTGAAGG TTGCCCACTA CGGTTATGTT CTCGAAACTG GACAGATCGT TCTCGAAGGA AAAGCCAGCG ACCTTCTGAA TAACGAAATG GTCAGAAAGG CCTATCTTGG TGTTGCATAA
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Protein sequence | MSDIVLEVQS LHVYYGAIHA IKGIDLKVPR GQIVTLIGAN GAGKTTTLSA IAGLVRAQKG EIIFNDQDIT NKPAHMINKM GIALVPEGRR IFPELTVYEN LMMGAYNRKD KEGIKRDLEW IFSLFPRLKE RLKQLGGTLS GGEQQMLAIG RALMSRPKLL MMDEPSLGLA PILVSEVFEV IQKINQEGTT ILLVEQNALG ALKVAHYGYV LETGQIVLEG KASDLLNNEM VRKAYLGVA
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