Gene Tpet_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1603 
Symbol 
ID5171448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp1604646 
End bp1605305 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content44% 
IMG OID640564129 
Productthioredoxin-related protein-like protein 
Protein accessionYP_001245185 
Protein GI148270725 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2143] Thioredoxin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAGGT TCTTAATCAT CGCGATTTTG GCTTTGAGTG TGATCTCACT GGCCCTCACT 
TTAGATGATG CCTACAGACT CGCAAACATC ACCCAGAGAA AGCTGATCAT GATGTTCTCG 
AGTCCAACCT GTTACTACTG TAATCTGTTC AAGAAAGAAG TATTCCCGAA AGAAGATTTC 
CAGGAAATTC TGATTCCAAA CTTCGTCTTC GTTGAGCTGT ACGCCACAGA TGAAAAAACC 
ACACTCTTTG CGAAGGAAGT TCTGGGAGAG GAATCGGTTA GCTACAGGGA TCTCTTCGCT 
GGATTTGGTG TGAGAGGAAC GCCTACGTTT TTCTTTTTCA AGGGAAAAGA AGGTCTGGGA 
TACCTTCCTG GCTACGTGGA CAAAGACAAC TTCATAAAGA TTCTGAAATA CGTCGCTCAG 
GAGTTGAAAG AAGACTTCCA GACCTACCTG AAGAAAGACG ATCCGTTCGT GGGTGAGCCG 
TTGATCATCG AAATTTCCAA AGAAGACGCA GATTTCGTTC TGAAAAAAGA TAAAAACGCT 
GTGAAAGTGG ATACCGTACC GAACGAAGTG AGAAGAGACA GGATATACGT GACGGATTCA 
CCTGATGTTG CAAAGACCCT TCAGGAAAAA GGCGCTCTCC GTGTTCTGCT CGTTAAATGA
 
Protein sequence
MKRFLIIAIL ALSVISLALT LDDAYRLANI TQRKLIMMFS SPTCYYCNLF KKEVFPKEDF 
QEILIPNFVF VELYATDEKT TLFAKEVLGE ESVSYRDLFA GFGVRGTPTF FFFKGKEGLG 
YLPGYVDKDN FIKILKYVAQ ELKEDFQTYL KKDDPFVGEP LIIEISKEDA DFVLKKDKNA 
VKVDTVPNEV RRDRIYVTDS PDVAKTLQEK GALRVLLVK