| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1601 |
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| Symbol | |
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| ID | 5170982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1602259 |
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| End bp | 1603266 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640564127 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001245183 |
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| Protein GI | 148270723 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCCTTA AAAACTACGT GATAACAAGA ATCCTCCTTG CTGTTCCCAT GATATTCATT
CTTCTGGCAC TCATATTCCT GGTGCTCAGG ATCATACCCG GGGATCCGGT GCTCGCTATT
CTCGGAGGAA AAGCACCGAA GGAAGTCATC GAACAGAAGA GACACGAGCT CGGTCTCGAT
AAACCCATCA TCGTCCAGTT TTTCGATTAC ATTGGAGATC TTCTCAAAGG TGATCTGGGA
AAATCTACAC TGACGGGAAG ACCCGTTTGG GAAGAAATAA AGGAGAGATT TCCCGCGACT
TTGGAACTGA CACTCTTCGC TTTCATCGTA GCCGTCCTCA TAGGTATCTT TTGGGGGAGC
TTCGCTGCGT ACAAAAGAGA CAGCGGTGTT GATATAGGTG CCAGGATGTT TTCAATGGTG
ATGTACGCGG TTCCGGTTTT CTGGTTCGGT TTGATGATGC AGTACATCTT CGGAGTTATC
TTGAGATGGC TTCCCGTTGG TGGGCGATTG TCACCCACTA TGAATTTGAA AGTGATAACG
GGTATCTATT CGATAGATGC GCTTTTCACA GGAAATTGGG AAGCACTGAA AGACGTCTTC
GAACATCTCT TACTTCCGGG ACTCACACTC GGACTCGTGA TCTCCAGCGT CTTTGTCCGT
ATGGTGAGGA ACAACACCGT TCTAACACTG GCCCAGGATT TCGTGAAGGC GGCTCGTGCC
CGCGGTTTGA AGGAGAGGGT AATTCTGTTC AGGTACGCCC TGAAAAACGC ACTGGTACCC
ATCTTCACCA TGATGGGTCT TCAGTTCGCT CTCCTTCTGG GAGGGGCGGT CCTCACAGAA
ACCACCTTCT CCTGGCCCGG TCTTGGAAGC TACCTTGTGA TGAAGATCAG ATACAGGGAC
TTCCCTGCCA TACAGGGCAC GGTTGTTTTC TTCGCTTTGA TCGTGGTGGT GATAAGCATT
CTCGTCGACG TGATCAACGC CTTGATAGAT CCTAGGGTGA GATACTGA
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| Protein sequence | MSLKNYVITR ILLAVPMIFI LLALIFLVLR IIPGDPVLAI LGGKAPKEVI EQKRHELGLD
KPIIVQFFDY IGDLLKGDLG KSTLTGRPVW EEIKERFPAT LELTLFAFIV AVLIGIFWGS
FAAYKRDSGV DIGARMFSMV MYAVPVFWFG LMMQYIFGVI LRWLPVGGRL SPTMNLKVIT
GIYSIDALFT GNWEALKDVF EHLLLPGLTL GLVISSVFVR MVRNNTVLTL AQDFVKAARA
RGLKERVILF RYALKNALVP IFTMMGLQFA LLLGGAVLTE TTFSWPGLGS YLVMKIRYRD
FPAIQGTVVF FALIVVVISI LVDVINALID PRVRY
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