Gene Tpet_1598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1598 
Symbol 
ID5170414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp1598760 
End bp1599731 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content48% 
IMG OID640564124 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001245180 
Protein GI148270720 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTGC TCGAGCTGGA AAACGTGAGC GTGAGATACA AAACTGAAGA AAAAACTGTG 
AACGCCGTCG AAAACATCTC CTTCCACCTG GAGAAAGGAG AAACCCTGGG TCTCGTCGGT 
GAATCCGGTT GTGGAAAGTC TACCCTCGGT TTTTCCATAA TGCGACTTCT TCCAAAGGGA 
ACGAAGATTG ATGGAAGCAT AAAAATCGAA GGGACAGATA TTTCATCTCT TTCGGACGAG 
GAAATGAGAC AGATAAGAGG TTCAAAAGTT GCGATGATTT TCCAGGATCC GATGACGTCG 
CTCAATCCGA TTCTCAGAAT AGAGGATCAT TTTGTGGAGA TGATCCTCAC CCACAGACCT 
GAACTGAGCA AAGAAGACGC CAGAGAACTC GCAGCGAAGG CCCTGGAAGA TGTTGGAATA 
AACAGAAACA GACTGAAGGA TTACCCGTTT CAGTTCAGTG GAGGAATGAG ACAGAGGGTG 
ATGATCGCCC TCTCCATAGT TCTCAATCCC GCTGTTTTGA TCGCCGATGA ACCCACCACA 
TCTTTGGATG TGATAGTTCA GGCTCAGATA ATGGAACTGC TCGAGAAGCT GACGAAAGAG 
CACAAAACCG CCATGATTCT GATCACCCAC GATATGGGGC TGGTCGCGGA AGCCGCAGAC 
AGAATAGGTG TGATGTACGC AGGGCACCTC GTGGAACTCG CATCGAAAGA GAGGATATTC 
ACCAATCCTC TTCATCCATA CACCGTTGGT CTTCTGAGGT CTATTCCGAA CACGGATGTG 
AACGATAGAG AACTGAGATA CATTCCCGGC TCTCCCCCTG ATCTTTCGAA TCCCCCTGAA 
GGTTGCAGGT TCGCTCCAAG ATGTGAGAAG GCAATGAAAA TTTGCTGGGA GAAAGAACCA 
CCGGAGTTTG AAATAGATGG AACGCGCGTG AAATGCTGGC TTTACGGAGG AGATCAGAAT 
GGCACTGATT GA
 
Protein sequence
MKVLELENVS VRYKTEEKTV NAVENISFHL EKGETLGLVG ESGCGKSTLG FSIMRLLPKG 
TKIDGSIKIE GTDISSLSDE EMRQIRGSKV AMIFQDPMTS LNPILRIEDH FVEMILTHRP 
ELSKEDAREL AAKALEDVGI NRNRLKDYPF QFSGGMRQRV MIALSIVLNP AVLIADEPTT 
SLDVIVQAQI MELLEKLTKE HKTAMILITH DMGLVAEAAD RIGVMYAGHL VELASKERIF 
TNPLHPYTVG LLRSIPNTDV NDRELRYIPG SPPDLSNPPE GCRFAPRCEK AMKICWEKEP 
PEFEIDGTRV KCWLYGGDQN GTD