Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1594 |
Symbol | |
ID | 5171408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1595223 |
End bp | 1595606 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640564120 |
Product | phage shock protein C, PspC |
Protein accession | YP_001245176 |
Protein GI | 148270716 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGC TCAAAAGGTC CAGAAAGAAC AGGATCATAG CGGGTGTTTG TGGAGGTTTT GCGGAGTACT TCAACGTCGA TCCGACTCTC GTAAGATTGA TCTGGGTTCT CATCACACTC GCGTGGGGAG CGGGTCTTCT GCTCTACATA ATCGCCTGGT TGATCATACC TGAGGAAGAG GGGAAAACAG AAAGCGAAGA AAAACCACTT CAAAACGCAG AAGGGTTGAA AGTGTTAGTC GGTGGCCTTC TCATCTTCTT GGGAATTGTC TTTCTCGCGT CCGCTTTTTT CCCAATCTTC TTCGGTGTGG CATGGAAGGT GGTTCTTGGC GTTCTGTTAG TGATCTTTGG TGTTCTCCTT CTTCTGAGGA GAGATGAAAA ATGA
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Protein sequence | MKQLKRSRKN RIIAGVCGGF AEYFNVDPTL VRLIWVLITL AWGAGLLLYI IAWLIIPEEE GKTESEEKPL QNAEGLKVLV GGLLIFLGIV FLASAFFPIF FGVAWKVVLG VLLVIFGVLL LLRRDEK
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