Gene Tpet_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1594 
Symbol 
ID5171408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1595223 
End bp1595606 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content47% 
IMG OID640564120 
Productphage shock protein C, PspC 
Protein accessionYP_001245176 
Protein GI148270716 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1983] Putative stress-responsive transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGC TCAAAAGGTC CAGAAAGAAC AGGATCATAG CGGGTGTTTG TGGAGGTTTT 
GCGGAGTACT TCAACGTCGA TCCGACTCTC GTAAGATTGA TCTGGGTTCT CATCACACTC
GCGTGGGGAG CGGGTCTTCT GCTCTACATA ATCGCCTGGT TGATCATACC TGAGGAAGAG
GGGAAAACAG AAAGCGAAGA AAAACCACTT CAAAACGCAG AAGGGTTGAA AGTGTTAGTC
GGTGGCCTTC TCATCTTCTT GGGAATTGTC TTTCTCGCGT CCGCTTTTTT CCCAATCTTC
TTCGGTGTGG CATGGAAGGT GGTTCTTGGC GTTCTGTTAG TGATCTTTGG TGTTCTCCTT
CTTCTGAGGA GAGATGAAAA ATGA
 
Protein sequence
MKQLKRSRKN RIIAGVCGGF AEYFNVDPTL VRLIWVLITL AWGAGLLLYI IAWLIIPEEE 
GKTESEEKPL QNAEGLKVLV GGLLIFLGIV FLASAFFPIF FGVAWKVVLG VLLVIFGVLL
LLRRDEK