Gene Tpet_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1587 
Symbol 
ID5170714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp1588979 
End bp1589659 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content47% 
IMG OID640564113 
Productmetal-dependent hydrolase 
Protein accessionYP_001245169 
Protein GI148270709 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.725937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCA CATTCCTGGG ACACGCCGTG GTGCTGATAG AGGGAAAGAA AAACATCATC 
ATCGATCCTT TCATTTCAGG AAATCCGGTT TGTCCTGTAA AATTAGAGGA TCTTCCAAAG 
ATCGATTACA TACTCGTGAC ACACGGACAC GGAGATCACC TCGGGGATGC TGTAGAAATA 
GCAAAGAAAA ACGATGCCAC GGTGATATCC AACTACGAAA TCTGCCATTA CCTCGGAAAA 
AAAGGTGTGA AGACCCATGC CATGCACATA GGTGGAAGCT ACCTCTTCGA TTTTGGCAGG 
GTGAAGATGA CACCTGCCGT TCATGGCTCT GGAATTCTCG ATGGAGACAG TATGATCTAC 
GGAGGAAATC CTGCTGGCTT TCTCATCACG CTCGAGCGAA AAAAGATATA CCACGCAGGA 
GACACCGGTT TGACCAGGGA GATGGAACTT CTCGGAGAAG AGAACGTGGA TGTAGCGTTT 
CTTCCAATCG GTGGAAATTT CGTCATGGAC GTGGAAGACG CCGTGAGAGC AACGGCGATG 
ATAAAACCGA AGAAGGTTGT TCCCATGCAT TATGGAACAT GGGAACTCAT CTTCGCGGAT 
GTGGAACTAT TCAAGAAGAA AGTGACGGAA ATGAGTGTTG AATGTGTGAT TCTTGAGCCG 
GGAGAATCGC TGGAATTGTG A
 
Protein sequence
MKVTFLGHAV VLIEGKKNII IDPFISGNPV CPVKLEDLPK IDYILVTHGH GDHLGDAVEI 
AKKNDATVIS NYEICHYLGK KGVKTHAMHI GGSYLFDFGR VKMTPAVHGS GILDGDSMIY 
GGNPAGFLIT LERKKIYHAG DTGLTREMEL LGEENVDVAF LPIGGNFVMD VEDAVRATAM 
IKPKKVVPMH YGTWELIFAD VELFKKKVTE MSVECVILEP GESLEL