| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1586 |
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| Symbol | |
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| ID | 5171139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1587491 |
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| End bp | 1588966 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640564112 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001245168 |
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| Protein GI | 148270708 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAAGTTT TTTTCTACGT TGTCTCGTTC GGATTTCTTG TGTTTGCGCT TTATCTTTTC
TGTCATGTGA GAAGGAAGAT CGAGTACTAC AGACAGCTGG AAAAGAGCCT CGATACCATA
GTTGATGGAC TTTCAAAACT CGATCCGAAC TCGCCTGAAG AAGAGTTCTT TCAGAAAATC
CTGGATATCG CGATGGAAGT TGTTCCGGAA GCAGTAAAAG GGAGCGTCTC CAGAATCACC
CCATCAGGAG ACTGGGTCTT TGTTGCCTCG AGGGGACACA TTGTAGATCT GTTTGGAAAA
AGATTTCCAT CCAGATATCT GTTCAGAGCT GGAAAAGATC CATTAGAGGT TGATTTCCTT
GACTATGACA GGGGACTTTT TCCAGACGAC ATGTGGAAAT TCTTTGAAAA GACTCTCCGA
GGTACGAGAA AGAGCCTCGT TGTGGGTATA TTTTCTGGAG ACGAATTCGT GGGAAACATC
GCCCTCGACA GTCCTTACTT TGGCTTTTCA GAACTTTCAA AAAAGGTCTT GAAATCACTG
GGAAACCTTA CGAGCACTTA TCTTCTCATG AGAAAAACTC TGACAAACGA ACAGCAACTT
CAAAAGATCA TGAGCACCAT ATTCACCCTC TTGCTCCTTT TCAGAAAACC CATCTCAGCC
GAAGAATTTC TCAAAGAGGC CCTGCAGAAG ATCGTAGAAG CGAGTAATGT TTTCACAGGG
GGAATCGTAT TCGAAGGGGA CATCCCCGTA TTTCATATGG GTATGGAGAA GATACCGGAA
TTCGATTTTG GAAAATCCCG AGAAGAGACA GAAAAAATAG AAAAACTGGA GAAAGAAGGT
GCTCATTACA TCATCGTGAA TCTGAAGGAT GAAAACATAC CTTCTTACCA CATGGTTTTT
CTGTCGAATG AAAACATAGC ACCTTCATTC TTTGGCGTTC TCAATACGTT TGCGGAAGTG
GTGTCTCTCT ATCTGAGAGA GTACCATCTT CATCAAAAGT ACCGTGAACT CGCACTGAAA
GATCCTTTAA CCGAAGCTTA TTCAAGGCAC TACTTCAACG AGTGGATATT CTCTCACATG
GCGTGGCTCA GGCGAAACCA GAAGAAGTCC ATTCTGGTGA TCATGGATGT GGACGGTTTG
AAAATGATAA ACGACACTTA CGGCCACCTC ATGGGGGACA AAGCACTCGT CGAATTCGTC
AAAACCCTGA AGAGAACCGT TCGAGAGTCG GATCTTGTTT TCAGATACGG TGGTGACGAG
TTCCTTCTGG TACTCGTCGA TAGCACCAAA GATAACGCTG CCAGTGTTTT GAAGAGAGTT
GAAGAAAACC TTAAAGATGT AGACCTGCCC TTCAAAATAG AATTCTCCTT TGGTTATGAA
GAGATAGACG GTTTCATGCC GATAGAAAGA GCGCTCGCGA GAGCGGACGA TCTTCTCTAC
AAAAACAAGT TCAAAAAGAG AGGTGGTTCA GAATGA
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| Protein sequence | MQVFFYVVSF GFLVFALYLF CHVRRKIEYY RQLEKSLDTI VDGLSKLDPN SPEEEFFQKI
LDIAMEVVPE AVKGSVSRIT PSGDWVFVAS RGHIVDLFGK RFPSRYLFRA GKDPLEVDFL
DYDRGLFPDD MWKFFEKTLR GTRKSLVVGI FSGDEFVGNI ALDSPYFGFS ELSKKVLKSL
GNLTSTYLLM RKTLTNEQQL QKIMSTIFTL LLLFRKPISA EEFLKEALQK IVEASNVFTG
GIVFEGDIPV FHMGMEKIPE FDFGKSREET EKIEKLEKEG AHYIIVNLKD ENIPSYHMVF
LSNENIAPSF FGVLNTFAEV VSLYLREYHL HQKYRELALK DPLTEAYSRH YFNEWIFSHM
AWLRRNQKKS ILVIMDVDGL KMINDTYGHL MGDKALVEFV KTLKRTVRES DLVFRYGGDE
FLLVLVDSTK DNAASVLKRV EENLKDVDLP FKIEFSFGYE EIDGFMPIER ALARADDLLY
KNKFKKRGGS E
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