| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1581 |
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| Symbol | |
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| ID | 5170127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1580650 |
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| End bp | 1583184 |
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| Gene Length | 2535 bp |
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| Protein Length | 844 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640564107 |
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| Product | alpha-glucan phosphorylase |
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| Protein accession | YP_001245163 |
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| Protein GI | 148270703 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02094] alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACACCAT CTTATAATCA ACGTAGAATA CTTCTGAAAG AAACCTCTCT GAGAGGAGGA
GAAATTGTGC TGGAGAAACT TCCCGAGAAC CTGAAAGAGC TCGAGAGCCT TGCCTACAAC
CTCTGGTGGA GCTGGTCCAG ACCTGCTCAG AGACTCTGGA GAATGATCGA TTCAGAAAAG
TGGGAGGAAC ACAGAAATCC CGTCAAAATA CTGAGAGAAG TCTCAAAGGA AAGACTGGAA
GAACTATCGA AAGACGAGGA CTTCATCGCT CTCTACGAAC TGACGCTCGA GAGATTCACA
GACTACATGG AAAGGGAAGA CACCTGGTTC AACGTGAACT ATCCCGAATG GGACGAAAAG
ATAGTTTACA TGTGTATGGA ATACGGACTG ACGAAAGCAC TTCCGATCTA CTCTGGAGGA
CTCGGTATCC TTGCCGGAGA CCACCTCAAA TCAGCCAGTG ATCTTGGCCT TCCTCTCATA
GCCGTAGGTC TTCTTTACAA ACACGGGTAT TTCACTCAAC AGATAGACAG TGACGGAAGA
CAGATCGAGA TCTTTCCAGA ATACGACATC GAAGAACTCC CGATGAAACC TCTCAGGGAT
GAAGACGGAA ACCAGGTGAT CGTAGAAGTA CCCATAGACA ACGATACTGT AAAAGCGCGT
GTGTTCGAGG TACAGGTCGG AAGGGTGAAA CTGTATCTTC TCGACACTGA CTTCGAGGAA
AACGAGGATA GATTCAGAAA GATCTGCGAC TATCTCTACA ATCCCGAGCC TGATGTGAGA
GTTTCCCAGG AAATTCTGCT CGGCATTGGT GGAATGAAAC TCCTGAAGAC TCTCAAGATA
AAACCTGGAG TCATCCACCT GAACGAAGGT CATCCCGCTT TTTCATCCCT CGAAAGGATA
AAGAGCTACA TGGAAGAAGG ATATTCCTTC ACCGAGGCCC TTGAGATCGT CAGACAGACC
ACAGTTTTCA CGACACACAC CCCCGTCCCC GCAGGTCACG ACAGGTTCCC GTTCGATTTC
GTGGAAAAGA AGCTGACAAA GTTCTTCGAA GGATTCGAAT CCAAAGAACT GCTTATGAAC
CTTGGAAAAG ACGAAGACGG AAATTTCAAC ATGACGTATC TTGCTTTGAG AACCTCCTCC
TTTATAAACG GAGTGAGCAA ACTTCACGCT GACGTATCGA GAAGGATGTT CAAAAATGTC
TGGAAGGGAG TTCCGGTGGA GGAGATCCCC ATTGAAGGCA TCACGAATGG TGTCCACATG
GGAACCTGGA TCAACCGCGA GATGAGAAAA CTGTTCGACA GGTACCTCGG TAGAGTCTGG
AGGGAACACA CTGACCTCGA AGGAATATGG TACGGAGTTG ACAGAATACC CGATGAAGAA
CTCTGGGAAG CGCATCTGAA CGCAAAGAAA CGATTCATAG ATTACATAAG AGAATCCATC
AAAAGGAGAA ACGAAAGGCT TGGAATCAAC GAACCACTGC CGGAGATCAG TGAAAACGTG
CTCATCATAG GTTTTGCCAG AAGGTTCGCA ACTTACAAGA GAGCCGTCCT GCTCTTCAGC
GATCTGGAAA GACTCAAGAG AATTGTCAAT AATTCCGAGA GGCCGGTTTA CATTGTGTAC
GCTGGAAAGG CCCACCCGAG AGACGAAGGT GGAAAGGAGT TTCTCAGAAG GATCTACGAA
GTTTCACAGA TGCCCGATTT CAAGAACAAA ATCATCGTAC TCGAAAACTA TGACATCGGA
ATGGCTCGAC TCATGGTGTC GGGTGTTGAC GTGTGGTTGA ACAATCCAAG GAGGCCCATG
GAGGCAAGCG GGACAAGTGG TATGAAAGCT GCAGCGAACG GTGTTCTGAA CGCGAGTGTA
TACGATGGCT GGTGGGTTGA GGGATACAAC GGCAGAAACG GATGGGTGAT AGGTGATGAA
AGCGTGCTTC CAGAAACAGA AGCGGATGAT CCAAAGGATG CCGAGGCTCT GTATGAGCTT
CTCGAAAACG AAATAATCCC CACCTACTAC GAAAACAGAG AAAAGTGGAT CTTCATGATG
AAAGAAAGCA TAAAGAGCGT GGCTCCAAAA TTCAGCACCA CCCGCATGCT CAAAGAGTAC
ACGGAGAAAT TCTACATAAA GGGACTTGTG AACAGGGAAT GGCTGGAGAG AAGAGAAAAC
GTCGAAAAAA TCGGAGCCTG GAAAGAAAGA ATCCTCAAGA ACTGGGAGAA TGTTTCCATA
GAGCGCATCG TTCTTGAAGA TTCGAAGAGC GTAGAAGTAA CTGTAAAACT GGGCGATCTC
ACACCGAACG ACGTGATAGT CGAACTTGTG GCTGGAAGAG GAGAGGGAAT GGAAGATCTC
GAAGTGTGGA AAGTGATACA CATCAGAAGG TACAGGAAAG AGAACGATCT ATTCGTTTAC
ACTTACACCA ATGGTGTTCT TGGTCATCTT GGATCTCCCG GATGGTTCTA CGCGGTGAGA
GTCATACCGT ACCATCCCAG GCTTCCCATC AAGTTCCTGC CCGAAGTACC GGTTGTCTGG
AAGAAGGTTC TCTGA
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| Protein sequence | MTPSYNQRRI LLKETSLRGG EIVLEKLPEN LKELESLAYN LWWSWSRPAQ RLWRMIDSEK
WEEHRNPVKI LREVSKERLE ELSKDEDFIA LYELTLERFT DYMEREDTWF NVNYPEWDEK
IVYMCMEYGL TKALPIYSGG LGILAGDHLK SASDLGLPLI AVGLLYKHGY FTQQIDSDGR
QIEIFPEYDI EELPMKPLRD EDGNQVIVEV PIDNDTVKAR VFEVQVGRVK LYLLDTDFEE
NEDRFRKICD YLYNPEPDVR VSQEILLGIG GMKLLKTLKI KPGVIHLNEG HPAFSSLERI
KSYMEEGYSF TEALEIVRQT TVFTTHTPVP AGHDRFPFDF VEKKLTKFFE GFESKELLMN
LGKDEDGNFN MTYLALRTSS FINGVSKLHA DVSRRMFKNV WKGVPVEEIP IEGITNGVHM
GTWINREMRK LFDRYLGRVW REHTDLEGIW YGVDRIPDEE LWEAHLNAKK RFIDYIRESI
KRRNERLGIN EPLPEISENV LIIGFARRFA TYKRAVLLFS DLERLKRIVN NSERPVYIVY
AGKAHPRDEG GKEFLRRIYE VSQMPDFKNK IIVLENYDIG MARLMVSGVD VWLNNPRRPM
EASGTSGMKA AANGVLNASV YDGWWVEGYN GRNGWVIGDE SVLPETEADD PKDAEALYEL
LENEIIPTYY ENREKWIFMM KESIKSVAPK FSTTRMLKEY TEKFYIKGLV NREWLERREN
VEKIGAWKER ILKNWENVSI ERIVLEDSKS VEVTVKLGDL TPNDVIVELV AGRGEGMEDL
EVWKVIHIRR YRKENDLFVY TYTNGVLGHL GSPGWFYAVR VIPYHPRLPI KFLPEVPVVW
KKVL
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