Gene Tpet_1579 details

Gene Information

• Locus tag: Tpet_1579
• ID: 5170147
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 1578076
• End bp: 1579932
• Gene Length: 1857 bp
• Protein Length: 618 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640564105
• Product: metal dependent phosphohydrolase
• Protein accession: YP_001245161
• Protein GI: 148270701
• COG category: [E] Amino acid transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; [COG2206] HD-GYP domain
• TIGRFAM ID: [TIGR00277] uncharacterized domain HDIG

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATAGGGA TCAGGGGGAT TGTTCTTTTC TTTCTGATCT TCTCACTTTC GATCTTTTCT 
CAGCCCCCTC GGATAGCCCT CGATGAGGAC TACGCACCAT TTTCTTTTTA CGATGAAAAC 
GGAAATCTTA TCGGGATCTC CGTCGATTTC TGGAAGCTCT TTCCAGAAAA GACGGGTGTG 
GAAGTTGAGC TCGTGCCTGT GAAGTGGTAC AGAGCGCAGG AATTGCTGAC TGAAGGAAAG 
ATAGACGCGA TCGATCAGAT CTTTAAAACA CCCGAGAGAG AAGAAGCCCT CTCCTTTTCC 
AGACCCATAT TCGAAATGAG ATCCTGTGTG TTCTTCAGGA AAGACCTTCC CATAAGAGAT 
TTTTCGGACC TGTCTTCTTA CGTTGTCGGC GCTCTCAGAG GAGAAGGTGC TGTGGAAACT 
CTTCGTGAGA AAAATCCGGA TGTGGAATTC GAGTTCTTCA ACGATTATTC CTCCATCGCG 
AAGGCGTTGA AAGAGAAGAA AATATCGGTT TTCCTTGGTG ATGATATAGT GGCAAGGTAC 
TACCTCTCGA AGGAGGACCT CCTTCCAGAG TTCAGAACTC TTCATCTTGA GACGAATTAT 
CTCCACGTTG CCGTTTTGAA GGGTAATGAA AGTGTTCTAT CGCTCATAAA TTCTGGACTG 
AACCGTATTT CTGAGGGAGA AAAGAATGAT ATCATCAGAA ACTACATACC GCTTGTCCTC 
GTGACACCCC TGTGGTTCTT GAGGGTGGTC TTTTATGGAA CTGCAGCTTT CGTGATATCT 
TTTGGCATTG CCCTGACGTT CATCTATTTG TTGAGAAGAA AAGTTGAGGG AAGAACCCTT 
CAGCTGAAAG AAGCAAACGA AGAATTGAAA GCCCAGAACG AAGAGATAGA AGCCCTCTAT 
CAGGAGGTCT CCGCGAACCA GGAAGAACTC GAGAAGCTCT ACGGTGAGAT CAGAGAGCTC 
AACGAGAGGT TCAGAGAATC GGTGTGGAAA ATAGCCAAAC TGGTTTTCAT TGAAGATAAG 
TCCAGATTCT TTTTCGAAGT GGGACAAATT GTGAAATACC TTCTGAACGT GAAAAACTTG 
AAAGTGATCC TCGATGATCG TGCACCTGAA AAAGTCGAAG GAACGGTATT TGAAATATCC 
CATTCAAATG AAAAACACGG TTACATTGTG CTGGAAGGCG ATCTCAGCGA AGATGAAAAA 
GGAGTTCTCG AGTCGCTTCT AACCATTGTC TCTGCCATAT ACACGTACAG AAAGTTGATA 
AGCAGAGAAA GAAAACTCTA CAGAGACATC GTGAAAACCT GGGTGAAAGC TCTCGAGTAT 
TACGACTATT ACACGAAAGG GCATTCGGAA GAGGTAGCTT ATTACGCTGT TGAGATCGGA 
AGGATGTTTG ACTTGGGCGA TGAAAAGCTG GAAAAACTCT ACTGGGCAGG CCTTCTGCAC 
GATATCGGGA AGATCTACGT ACCCCAGGTT GTTTTGAACA AAACAAGTAA ACTCGACGAA 
CGAGAATTTG AGCTGATAAA GATACATCCC GTTAGGGGAT ACGAGCTGGT CAAGGAGATC 
GAGGGTTTTG AAGATGTTGC TATCTGGATA AGGCATCACC ACGAAAGATG GGACGGAAAA 
GGTTACCCGG ACGGTCTCAA AGGTGAAGAA ATACCCTTCG AAGCCCGTGT TCTGTGTGTG 
GCGGATTCCT ATCAGGCGAT GAGAAGCGAC AGGCCCTACA AGAGAGGAAA GAGCGTCGAA 
GAATCGATTC AAGAGCTGAG AAGAAATGCG GGACGGCAGT TCGACCCCGT CATCGTGGAG 
AAGTTCATAG AGTTTTTGGA AGGGGGAGGA GACCTTGGAA CTGGGCATCA GGGATAA 

 

Protein sequence

MIGIRGIVLF FLIFSLSIFS QPPRIALDED YAPFSFYDEN GNLIGISVDF WKLFPEKTGV 
EVELVPVKWY RAQELLTEGK IDAIDQIFKT PEREEALSFS RPIFEMRSCV FFRKDLPIRD 
FSDLSSYVVG ALRGEGAVET LREKNPDVEF EFFNDYSSIA KALKEKKISV FLGDDIVARY 
YLSKEDLLPE FRTLHLETNY LHVAVLKGNE SVLSLINSGL NRISEGEKND IIRNYIPLVL 
VTPLWFLRVV FYGTAAFVIS FGIALTFIYL LRRKVEGRTL QLKEANEELK AQNEEIEALY 
QEVSANQEEL EKLYGEIREL NERFRESVWK IAKLVFIEDK SRFFFEVGQI VKYLLNVKNL 
KVILDDRAPE KVEGTVFEIS HSNEKHGYIV LEGDLSEDEK GVLESLLTIV SAIYTYRKLI 
SRERKLYRDI VKTWVKALEY YDYYTKGHSE EVAYYAVEIG RMFDLGDEKL EKLYWAGLLH 
DIGKIYVPQV VLNKTSKLDE REFELIKIHP VRGYELVKEI EGFEDVAIWI RHHHERWDGK 
GYPDGLKGEE IPFEARVLCV ADSYQAMRSD RPYKRGKSVE ESIQELRRNA GRQFDPVIVE 
KFIEFLEGGG DLGTGHQG