| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1571 |
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| Symbol | |
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| ID | 5169995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1569449 |
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| End bp | 1572961 |
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| Gene Length | 3513 bp |
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| Protein Length | 1170 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640564097 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_001245153 |
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| Protein GI | 148270693 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGATTGA AAAAACTCTA CTTAAAAGGT TTTAAATCCT TTGGAAGACC TTCCCTGATA
GGTTTCTCCG ATCGCGTGAC CGCTATCGTT GGCCCCAACG GTAGCGGGAA ATCCAACATC
ATAGATGCCA TAAAATGGGT GTTCGGTGAA CAATCGAAGA AAGAGCTCCG TGCGAGTGAA
AAGTTCGATA TGATCTTCGC TGGATCGGAG AACCTTCCAC CGGCTGGTTC TGCCTATGTG
GAGCTTGTCT TTGAAGAAAA CGGAGAGGAA ATAACCGTGG CCCGTGAGTT AAAGAGAACG
GGAGAGAACA CTTACTACCT CAACGGAAGC TCGGTTAGAT TGAAAGACAT CAGAGATCGC
TTTGCAGGTA CCGGTCTTGG AGTGGACTTC TACTCCATTG TGGGACAGGG ACAGATAGAT
AGAATTGTTA ATGCCTCTCC AGAAGAATTG AGGTTGCTGC TGGAAGAGGC TGCAGGGGTT
TCCATATACA GGGAGAAGAA AAAGGAAACA GAGATGAACC TTGAAAGAAC GAAGGTGAAC
CTCGACAGAG TGAAAGACGT TCTGTTCGAG CGTGAAAGGC AGATGAAATC TCTCTACCTC
AAGGCCAAGC GTGCTGAAAG GTTCAGGGAA TACACTGCTC AGATTGAAGA ACTTCAAAGA
ATCTACTACG GAAACGCTTT GAAGAGAGAA AGGAAAAAAC TGGAATTCTA CCAGGAAGAA
GAGAAGAAGA CAAACGAGAA AATAAAGAAT ATCCAGAAAG AACTGGTGGA ACTGGAGACG
AAGTGGAGTA CTCTGAGAAG TGAGTTCGGA GAGATGGACC AGGAGATAGA ACGTTACACG
AAGCTCCTCG AGGATTATAA AAAAAGACAG AATGATCTTG TGGAGATGAA AGGATTCTAC
TCTTCAAAGC TCGCAGACAG TGAAAACAAG TACGTGGAGT TATCCACCAG GCTCGACGAG
CTGGAAAAGC GAAGAGAAGA GCACAAAAGA CGTCTTGAAG AAATGGAGTA CATATTCAAG
GGAGTGACAG GAGAATACGA GAAAAAGGCA AAAGAACTCG AAGCGTTCGA AAAAGAAAAA
GAAAATCTTC TCTCAAGATT CAGTGAGAAA GAGAAAGAAT TTCTGAAAGT CAGGGACGAG
ATCTCCAGGT TAGAAAAGCA GATACTCAAA CTGGAGAGCG AGCTTTTGAG GATAGGAGAA
ACACTCGAGG ACCTCGAAAA GAGAAGAAAA ATAACGGAAA ACCAGATACT GACAAGGAGA
AGAGAACTCG AAGATAAGAA GAGCGAATTC AAAGAAATAT CAAAGCGTGT GGAAGAATTC
GATGAGAAAG AAAGAAAATT GACAGAAGAA TTGAACACTG TTCGTGAGAG ATTGGAAGAG
GTCGAGAAAG AAATCAGAAA AATCACCTCG GAAATAGACG TGAAGGAGAG AAGACTGAGA
GAGATCCTGT TCGAAAAAGA AATGATCGAG CGTGACATGA GAGAGTACAA GGGATTCTCA
CGGGCCGTGA GAGCAGTTTT CGAGGAAAAG GAGCGCTTTC CCGGACTCGT TGATGTAGTC
TCGAACCTGA TAGAGGTGGA TGAAAAGTAC TCCCTCGCTG TGAGTGTACT TCTCGGTGGG
ATGGCTCAGA ACATCGTGGT GAGAAACGTA GATACAGCGA AGGCGATCGT GGAGTTTCTG
AAGCGGAACG AAGCAGGAAG AGTGACGATA CTTCCACTCG ATCTGATAGA CGGTTCTTTC
AACAGGATAT CCGGACTGGA AAAAGAGAAA GGGTTTGTGG GGTACGCCGT TGACTTGGTG
AAACTTCCTT CAGATCTCGA GGTTCTTGGA GGATTTCTCT TTGGGAATTC CGTAGTGGTG
GAAACACTCG ACGATGCGAT CAGGATGAAG AAAGAATACC AGCTGAACAC CAGAATCGCT
ACCCTCGATG GTGAACTCAT AAGCGGAAGA GGGGCTATAA CAGGAGGAAA GGAAGAAAGA
TCGATCAACG TGTTTGAAAA ACACATAAAA CTGAAGCATC TGGAGCAGGA AATGGAAGAA
ACAGAGAGAC AAATCGCAGA AAATAGGGAT GAACTGGCCA GTCTGAAGAC AGAACAGGAA
AACCTGCGAA ACCAGGAAAC GATCGTCCAG AGGGAGCTGT TCGAACTCTC CAGGAAATCG
TCTTCGACCA AGACTGTTCT GTCCGAGATC CTGAGAACCA TCAATCAGCT TCAAGAAGAA
GTGGAAAATC TGGAGAAGCT CCTGGTTGAG TACAGAGCAA AAGAAGAAGG ACTGAACGCG
AGAAGAGAAA AGATCTTCGA GGAAATCGAC GAACTGAAAC AGAACAGAGA AGACCTTCAA
AGATCGTTGG CCGAATACTC CGAAGAACTC GAGAAAGAAA AGAGGATCCT CGATGAACTC
AACGAAAAGA TTTTCACACT CAGAGCAGAG GTTGGAAATC TCCTGGAAAC AAAAGATCGA
TACGAAAAGG AAATGCGAGA CACAAGAAAA ACGATAGAAC GAATTGCTCG GGAAACGGAA
GACATAAAGT TGCAGATGAC GAGCCTTGAA GAGGAAATGG AAAACTACAG AAAGTTCATA
AGAGAACACG AAAGAGAAAT CGAGCACTTG AAGAAAGAAA TGGACAATGT GTTCGAAGCC
ATGAAACTCC ACAGATCAGG TAAAGAAGAG AAGATGCGAG AACTTCAAGA AGTGGAAAAC
AGAATGAACG AACTGAAGGA AGAAAAGGAA GGACTGAGAA ACCACCTCCA TCAGATAGAT
CTGGCTCTCC AGGAGACCAG GTTAAAGATA GCGAATCTTC TGGAGGAGTT TTCCGGAAAC
GAAGAAGATG TAGAGGAACT CGGTGAGGAA AAGCTTGAGG AGATCTATAG ACAGATAAAA
GATTTGGAAA ACAAAATAAA GTACCTCGGC CCCGTCGATC TCACGGCGAT AGACGAGTAC
GAAAAACTCC GCGAAGAGTA CGAAGAAATA CTGAAACAGA AAGAAGATCT CGAGGAAGCG
AAACGAAAAC TCGAAGAGAT CATAGAAAAA ACGGATCGAG AAGCAGAGAG TTTACTCTTC
GACGTTTACC AGAGAGTGAA CGAAAGCTTC AACAGGTTCA TTTCTCTTCT CTTCTTCGGT
GGTGAGGGAA GGCTCAACAT CGTTTCTGAA GCCAAAAGCA TTCTCGACGC GGGTTTTGAA
ATATCCATAA GAAAACCGGG AAGAAGAGAT CAGAAACTGA GCCTTCTTTC GGGTGGTGAG
AAGGCGCTCG TGGGATTGGC TCTGCTTTTC GCCCTCATGG AGATAAAACC GAGCCCCTTC
TACGTGCTCG ACGAGGTTGA TTCTCCTCTC GATGACTACA ACTCTGAAAG ATTCAAGAGG
CTCCTCAAAG AGAACTCGAA GCACACCCAG TTCATCGTGA TCACGCACAA TAAAATCGTG
ATGGAAGCTG CCGATCTTCT ACATGGGGTG ACCATGGTAA ACGGTGTGTC GGCCATCGTT
CCGGTAGAAG TGGAGAAAAT ACTGGAGGTG TAA
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| Protein sequence | MRLKKLYLKG FKSFGRPSLI GFSDRVTAIV GPNGSGKSNI IDAIKWVFGE QSKKELRASE
KFDMIFAGSE NLPPAGSAYV ELVFEENGEE ITVARELKRT GENTYYLNGS SVRLKDIRDR
FAGTGLGVDF YSIVGQGQID RIVNASPEEL RLLLEEAAGV SIYREKKKET EMNLERTKVN
LDRVKDVLFE RERQMKSLYL KAKRAERFRE YTAQIEELQR IYYGNALKRE RKKLEFYQEE
EKKTNEKIKN IQKELVELET KWSTLRSEFG EMDQEIERYT KLLEDYKKRQ NDLVEMKGFY
SSKLADSENK YVELSTRLDE LEKRREEHKR RLEEMEYIFK GVTGEYEKKA KELEAFEKEK
ENLLSRFSEK EKEFLKVRDE ISRLEKQILK LESELLRIGE TLEDLEKRRK ITENQILTRR
RELEDKKSEF KEISKRVEEF DEKERKLTEE LNTVRERLEE VEKEIRKITS EIDVKERRLR
EILFEKEMIE RDMREYKGFS RAVRAVFEEK ERFPGLVDVV SNLIEVDEKY SLAVSVLLGG
MAQNIVVRNV DTAKAIVEFL KRNEAGRVTI LPLDLIDGSF NRISGLEKEK GFVGYAVDLV
KLPSDLEVLG GFLFGNSVVV ETLDDAIRMK KEYQLNTRIA TLDGELISGR GAITGGKEER
SINVFEKHIK LKHLEQEMEE TERQIAENRD ELASLKTEQE NLRNQETIVQ RELFELSRKS
SSTKTVLSEI LRTINQLQEE VENLEKLLVE YRAKEEGLNA RREKIFEEID ELKQNREDLQ
RSLAEYSEEL EKEKRILDEL NEKIFTLRAE VGNLLETKDR YEKEMRDTRK TIERIARETE
DIKLQMTSLE EEMENYRKFI REHEREIEHL KKEMDNVFEA MKLHRSGKEE KMRELQEVEN
RMNELKEEKE GLRNHLHQID LALQETRLKI ANLLEEFSGN EEDVEELGEE KLEEIYRQIK
DLENKIKYLG PVDLTAIDEY EKLREEYEEI LKQKEDLEEA KRKLEEIIEK TDREAESLLF
DVYQRVNESF NRFISLLFFG GEGRLNIVSE AKSILDAGFE ISIRKPGRRD QKLSLLSGGE
KALVGLALLF ALMEIKPSPF YVLDEVDSPL DDYNSERFKR LLKENSKHTQ FIVITHNKIV
MEAADLLHGV TMVNGVSAIV PVEVEKILEV
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