| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1563 |
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| Symbol | |
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| ID | 5170391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1561825 |
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| End bp | 1563033 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640564089 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001245146 |
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| Protein GI | 148270686 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCGAA CCTACAAGTT CAGAATCTAC CCTACGAGAG AACAAGAAGA AAAACTGGCC
AAACATTTCG GTCACACCAG ATTCGTGTAC AACTTCTTTC TGAACTACGC CAACATCATC
TACAGAGTAA TGGAACGTCC TACATACTAC AACGAATGGG CATCTGTTTT GGTAAAACTC
AAAAAGACAA ACAAATATTC ATGGCTCAAC GAAGTGAACT CTCAAGCGCT CCAGCAGTCG
CTGAAAGATT TAGAACGCGC ATTCAAAAAT TTCTTCAAAA AGCAAGCTGG CTATCCAAAG
TTCAAGAAAA AGAAATTCTC CCGCCAAACC TTTCGTATTC CACAGCACAT TCAGCTGTAT
ATCAAAGAAG ACAATCCAAA ATACGGCTGT ATATTCGTTC CCAAGTTCAA AGAAGGGATA
AAAGTGCGGC TTCACAGAAA GCTTCCGAAA GACGGAAAGA TAAAACAAGC AACGTTCATC
AAAACACCAA CGAACAAATA CTACGCTGCG ATAGTCTTTG AAGTCCAAGA TGCTGAAGTA
CAAAATACTT CCACCGACAT TCTAGGTATA GACCTTGGAA TCAAAGACAC AATCACATTG
AGCGATGGCA AGAAATATAA AATGCCAGAC CTTTCAAAAT ACGAGAGACA GATCAAAAGA
CTTCACAGAC GATTATCCAG GAAACAGAGA GGTTCAAAGA ACTGGGAAAA AGCACGTTTG
TGTCTTGCAA AGCTGTACGA GAAAATAGTC AACATAAAAA ACGACTGGCT TCACAAGATC
ACACACGATC TTGTCAGCGA AAGCCAAGCT GGAAAGATCG TGGTGGAAGA TCTCAACATC
AAAGGTATGG TTCAAAACCA CAGACTTGCC AGGCACATCC ACATGCAGTC GTGGAGGAGA
TTCTTAGAAC TTCTCGAGTA CAAGGCAAAG CGCTGTGGAA TCGAAGTGAT AAAAGCGAAC
AGATACTATC CCTCAAGTCA GATGTGCAGT GAATGCGGAT ACATAAACAA AGAAGTCAAA
GACCTGAGCG TTAGAGAATG GACGTGTCCT GTATGTGGAG CGCATCACGA TAGAGACGTG
AACGCTGCGA AGAATTTGGT CAGGTACGGC TTGATGCTTT CAATAGGGCG GGAACCGTCC
GAGTTCATGC CTGTGGACAG TGCTCTGGCG GCGGAACCCG AAAGGGGTCT ACGAGCTATC
ACGGGTTGA
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| Protein sequence | MLRTYKFRIY PTREQEEKLA KHFGHTRFVY NFFLNYANII YRVMERPTYY NEWASVLVKL
KKTNKYSWLN EVNSQALQQS LKDLERAFKN FFKKQAGYPK FKKKKFSRQT FRIPQHIQLY
IKEDNPKYGC IFVPKFKEGI KVRLHRKLPK DGKIKQATFI KTPTNKYYAA IVFEVQDAEV
QNTSTDILGI DLGIKDTITL SDGKKYKMPD LSKYERQIKR LHRRLSRKQR GSKNWEKARL
CLAKLYEKIV NIKNDWLHKI THDLVSESQA GKIVVEDLNI KGMVQNHRLA RHIHMQSWRR
FLELLEYKAK RCGIEVIKAN RYYPSSQMCS ECGYINKEVK DLSVREWTCP VCGAHHDRDV
NAAKNLVRYG LMLSIGREPS EFMPVDSALA AEPERGLRAI TG
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