Gene Tpet_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1558 
Symbol 
ID5171390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp1553667 
End bp1554647 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content45% 
IMG OID640564084 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001245141 
Protein GI148270681 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0166041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCGT TGATATCGGG AAAGAATTTG AAAGCTTATT ACGTGCTTGA CTTTTGGGGT 
AGTAAAAAAA TAGTAAAAGC TGTTGATAAT GTTAGTCTTG AAATACTACC TAACGAAATT 
TACGGCATAG CTGGTGAATC GGGTTGTGGA AAGTCCACGC TTTTGAAAGT CTTGCTTGCT 
CTTCTCGATC CACCGCTACG TCTGATGGAT GGTGAGTTGT TGTACAACAT AGAAGGAAAT 
CTTACGAATG TAACATTGTT GAAAAGTGAA GCAACAAGGA GATTGAGATG GAGTTTTATT 
TCTTACATTC CACAAGGATC AATGCACGTG CTCAATCCCG TAAAGCGAGT GAGGGATACC 
TTCATAGAAA TTCTGAGCAG TCACGTTAAA AAGCAGACTA AGGAGTTTCT CGACCTCGCA 
GTTCAGCATC TGAAGGATCT TGGACTTCCC GAGAGGGTTC TGAACATGTT CCCACATCAG 
CTGTCGGGAG GTATGAGACA GAGGGTTACC ATAGCACTCG CCACAGTCTT GAAACCCCGC 
GTCATATTCG CAGATGAACC AACAACGGCA CTCGATGTGG TGGCTCAACG AGCTGTTATG 
CAACTAATAA GAAAGATTCA AAATGATCTA AAAAACACCG TTGTTCTGGT AACTCATGAT 
ATGGGTGTGC ACGCTCAAAT CGCAACGAGG ATGGCGATCA TGTACGCGGG AAAGATCGTG 
GAGGAGGGCC CCACGCTGGA AATTTTCAAA AATCCTCTCC ATCCTTATAC GCGTTATCTG 
ATACAGTCTC TTCCATCAAT CGGTGATAAG AAATTGAGAT CAGGAATTCC CGGTTCGCCA 
CCCTCGCTGG TGACACCCCC GCCGGGGTGC AGATTCCACC CGAGATGTCC ACATGTTACC 
CAGAGATGCA GGGAAGAAGA ACCACTTTTA AAAGAGATAA AACCGGGTTA TAAAGTAGCT 
TGTTTTTTAA TGGAGAGGTG A
 
Protein sequence
MEALISGKNL KAYYVLDFWG SKKIVKAVDN VSLEILPNEI YGIAGESGCG KSTLLKVLLA 
LLDPPLRLMD GELLYNIEGN LTNVTLLKSE ATRRLRWSFI SYIPQGSMHV LNPVKRVRDT 
FIEILSSHVK KQTKEFLDLA VQHLKDLGLP ERVLNMFPHQ LSGGMRQRVT IALATVLKPR 
VIFADEPTTA LDVVAQRAVM QLIRKIQNDL KNTVVLVTHD MGVHAQIATR MAIMYAGKIV 
EEGPTLEIFK NPLHPYTRYL IQSLPSIGDK KLRSGIPGSP PSLVTPPPGC RFHPRCPHVT 
QRCREEEPLL KEIKPGYKVA CFLMER