| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1554 |
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| Symbol | |
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| ID | 5170507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1546322 |
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| End bp | 1548793 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640564080 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001245137 |
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| Protein GI | 148270677 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3833] ABC-type maltose transport systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.182842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCAGA GAAGAGGGAA TATCTTTACA CACATCTTTC TCATTTTCAT AATTGCGGTG
ATTCTGTTTC CCGTTGTCTG GGTAGTAACA ACGTCTCTCA GAAGAGATGA AGCGGCCTTT
TCCTCGAAAC TGTTCACGTC ACGACTGACT CTGCAACACT ACAGGGATCT TGTGGCACCC
GAAAAGAATC TTCCTTTTCT CGTGCAGGAT CTCCAGGCAA TGATTTCAAA GGTAAAACCT
TACGATACCT GGTCTGAGGA AGAACTCAAG GACGCTGTAG GGAGTTCTAT CGAAAAAGTG
AAATCCTATC TGTCAGAGAC GGAGGCTAGG TTGAACGACG CTGTGAATTC CTTTGAAAGA
GTTGATGCTT TTTTGAACGA TCACTCCGAA GAGATAAAAA ACAGAACGAT CGAGGAAATG
AGGGAACTTC TTTCATCCAT CCAGATACCG GATCTGAGTG ATTCGGAGGA AAACAGAGCG
GCTCTTTATC TCGTTCTTTC AAAGGAAAGA TACAATTCAA CAGCTCACAA GGCGTTGAAA
GAGTTACTGG AAAGGTTCAC GGGTGTTGAC ACCGGTACAA GAGACGGATA CGAAAAAGCG
ATAGAGAGTC TGAAAGAAAG CTACGAAAAA TTGGCTGATG GATACGATGG ACTCATTGAA
GAAACTCAAA GAGAACTGAA TGCTGTGAAA GAGGAGATGT CTTCTCTCAG ACAACAGTAC
AGTGATCTCC AGGATGATGT AATGGAGGCC AATCTCGTGA TCGAAAAAGA CATAATACCG
GAGCTGGAAA GAATAAAGAT CTCACTTTCA GAACTCAACA ATCTCAGGGA ACAAATAAGA
CAAACTACGT TGAGAAGTCC ATTTCCTGTG GATGATGAAG AATTCTCCCG AAACATCTCA
GAAACCGTTC AGATGCTGAA TGAAATCCTC GATGAGATGA GCACCTTCGC TGAATACGAT
TCGTTGAAAG ATTTACTTGT GGAATTGAAA AAAGAGCTTA CAAAACTCTC CGAAGGAAAC
GAAGATTTGA GAGACCGTCT TCTTTTCTCC GATCTTGTGA AAATCTACGA AGAGTTGCAT
CCAAGGCTCA TCAGAATTCT GAAGGAAGCA GTCGAAACTA TTGCCAGTAT AAAAGACAGA
ATAACAGTTC TGAGCGTTCT CAATGAACGT CTAAAGGATC TTGAAATCCT GGAAAAGGAT
CTAACTGCGA AAATTTCTGA GTATCAGCAG AAAATTTCTG AGGTTCAGCA GAAACTGTTG
GAGCCTCAGA GAACGCTGAA CCTTATCGTT TTCAGATACA ATCTTGAAAC AACGATCTCT
TCACTTGAAA GAGTTAAAAC TTTCAAAAAA ACTGATCTCC TCAGATACTC TTCTGCTCTG
AAGACTCTTC GAGATTTCAT GAATTCTTAC TGGGAAAAAG ACGAACTCTA CAGCAGGATA
TCCAGAGTGG TAAAGGAGAT GCGATGGATA GAAGAGTACA GAGATTTTGC GAGCAAATTC
GACGTCTTCC CGGAGAATTT GAAGACAGTA CTGAAAGAAA TGCACAACTC ACTGAGCGAC
CTCGAAAGAT CTTACGGTGA TCTCGTATCT CTTTCATCTC AGGGAGTGTA CGTGTCTTCA
AGTGTTCTGA GCAGAATGTA TGACATTGTG AAGATGGATT TCGTCAACAA AGTCAGGGCG
AACATGTCAG TTGCATCGAG GCGGGCCGGT AACCTGATTG ACCTTGTACC ATTCTCCGAA
GTTAAGAAAG ACCTGAGAAA TATAGACAGA GAGCTTTTCA GAATAGACCA GATCTGGAAA
CAGAAAACGA AACACTATTT CTGGCTGTGG GTTCTCAACT CCGTGATCGT ATCCCTGATA
GTGGCATTCA TAACAACGAC CGTGTGTGCT ATAGCGGCTT ATCCATTCAG TAGAATGAGG
TTCTTTGGAA GGCGTTACGG AATCATGGCA CTCCTTCTGA TACAGATGTT CCCGGGTGTG
ATCTTCATGA TTGCCATATA CGACCTTCTG AACTTCATGG GAAAGTACAT TCCATTCATA
GGAATTGACA CTCTAGGTGG TTTGATCTTC GCATATCTCA CCAACATCGC TTACAACATG
TACTTGATAA AAGGTTTCTA CGACACAATT CCCACCTCGC TTGAGGAGGC AGCCATCGTC
GATGGAGCAA CGCGTTTCCA GAGTTTCTAC AGGATCATAA TTCCACTTGC AAGACCAATT
CTCACGGTGG TGTTCCTGCT GGTCTTCATT GGAACGTTCA ACGAATACGT TGTTGCGAGG
ATAATCCTTC AAAATGTGAG GCACTACACG TACGCTCTTG GTCTTCAAGC GTTCGCCACG
GGTCCATATG AAACGGAATG GGGACTTTTC ACAGCGGCAG CCCTTCTTGG AATGACACCG
ATGGTGATTC TGTTCCTCTC ACTCCAGAGG TATCTCGTGA GTGGTCTTAC AAGGGGTGCA
GTTAAAGAAT GA
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| Protein sequence | MVQRRGNIFT HIFLIFIIAV ILFPVVWVVT TSLRRDEAAF SSKLFTSRLT LQHYRDLVAP
EKNLPFLVQD LQAMISKVKP YDTWSEEELK DAVGSSIEKV KSYLSETEAR LNDAVNSFER
VDAFLNDHSE EIKNRTIEEM RELLSSIQIP DLSDSEENRA ALYLVLSKER YNSTAHKALK
ELLERFTGVD TGTRDGYEKA IESLKESYEK LADGYDGLIE ETQRELNAVK EEMSSLRQQY
SDLQDDVMEA NLVIEKDIIP ELERIKISLS ELNNLREQIR QTTLRSPFPV DDEEFSRNIS
ETVQMLNEIL DEMSTFAEYD SLKDLLVELK KELTKLSEGN EDLRDRLLFS DLVKIYEELH
PRLIRILKEA VETIASIKDR ITVLSVLNER LKDLEILEKD LTAKISEYQQ KISEVQQKLL
EPQRTLNLIV FRYNLETTIS SLERVKTFKK TDLLRYSSAL KTLRDFMNSY WEKDELYSRI
SRVVKEMRWI EEYRDFASKF DVFPENLKTV LKEMHNSLSD LERSYGDLVS LSSQGVYVSS
SVLSRMYDIV KMDFVNKVRA NMSVASRRAG NLIDLVPFSE VKKDLRNIDR ELFRIDQIWK
QKTKHYFWLW VLNSVIVSLI VAFITTTVCA IAAYPFSRMR FFGRRYGIMA LLLIQMFPGV
IFMIAIYDLL NFMGKYIPFI GIDTLGGLIF AYLTNIAYNM YLIKGFYDTI PTSLEEAAIV
DGATRFQSFY RIIIPLARPI LTVVFLLVFI GTFNEYVVAR IILQNVRHYT YALGLQAFAT
GPYETEWGLF TAAALLGMTP MVILFLSLQR YLVSGLTRGA VKE
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