Gene Tpet_1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1541 
Symbol 
ID5170631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1531206 
End bp1532006 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content49% 
IMG OID640564068 
ProductRpiR family transcriptional regulator 
Protein accessionYP_001245125 
Protein GI148270665 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000907266 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAATAA AAGATAAGAT CCTGAACGTT TACACACAGC TCAGTCCCGC AGAGCGCAGA 
GTAGCGGATT ACGTACTCGA AAGACCGGAC GACGTCATTC ACTACTCGAT CACAGAATTC
GCAAAGATCG TGGGTGTGAG CGAGACCACG ATTCACAGGA TGATCAAAAA GCTCGATTTC
GAGGGATACC AGGCCTTCAA GATCGCACTT GCAAGGGAAC TCAGCGGGAT CGAAGAAACC
ATAGAAAGAA GAGATTTCAT AGACGAGGAG ATAGACATCC TCAGAAGGCT CAAGGACACT
CTCGATATGA AGAATGTGGA AAAGGCCGTG GAGTGGATAC TCTCCGCCCA TCGAATTCTC
TTCTTCGGCG TGGGACTCTC GGGAGTGGTT TCTGAGTACG CGAGTCTGAA GTTCTCTCTT
CTTGGTTTCC ACACGTTCTT TTCCAACGAT CCTCACGTTC AGGTGATAGA GGCCGTGAAT
CTGACCGGCG ATGATCTTGT GATCTCGATC AGTCACACAG GAAACATCAG AGACACGGTG
AAATCCACCC AGGTTGCGAA AGACATGGGA GCGAAGACGA TCGCAATTAC AACGAACAGA
CAGTCTGAGC TCGCCAGGGT GGCTCATCTG GTGCTTCAAA GCCCGCCTGT GAAATACGAC
ACCTACGAAT TCCTCAGAGA GAACATCGGA GAGATCGCCG TTGTGGATGT GCTCTTCAAA
GAGACGTTTC AGAGAATATA CCGGGAGAGA AAGAAGCACT TCGAGAACCT GGAGGGAGTG
TTCAAACCGA AGAGATTCTG A
 
Protein sequence
MKIKDKILNV YTQLSPAERR VADYVLERPD DVIHYSITEF AKIVGVSETT IHRMIKKLDF 
EGYQAFKIAL ARELSGIEET IERRDFIDEE IDILRRLKDT LDMKNVEKAV EWILSAHRIL
FFGVGLSGVV SEYASLKFSL LGFHTFFSND PHVQVIEAVN LTGDDLVISI SHTGNIRDTV
KSTQVAKDMG AKTIAITTNR QSELARVAHL VLQSPPVKYD TYEFLRENIG EIAVVDVLFK
ETFQRIYRER KKHFENLEGV FKPKRF