Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1537 |
Symbol | |
ID | 5170302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1525241 |
End bp | 1526308 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640564064 |
Product | ABC transporter related |
Protein accession | YP_001245121 |
Protein GI | 148270661 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0442847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCGCAGG TAAGAATAGA CGGAGTGAAG AAATATTTCG GGAATGTGAA AGCCCTCGAT GGAATCGACC TTGTTGTGAA CGAAGGGGAG TTCCTGGTTC TTCTCGGTCC ATCCGGCTGT GGAAAGACGA CCCTTCTGAG GTGTATAGCG GGCCTCGAGC AGGTGACCGG GGGAAGGATC TTCTTCAACG ATCGCGATGT GACGAACCTT CCTCCGAAGG ACAGGAACAT TTCGATGGTC TTCCAGAGCT ACGCGGTGTG GCCCCACATG AAGGTGTACG ACAACATCGC GTATCCTCTG AAACTGAAAA AAGTCCCGAA AGAGGAGATA GAAAAGAGGG TAAAGTGGGC AGCGGATCTC CTTCACATCT CCGAACTCCT CGACAGATAT CCCGCGCAGC TCTCCGGAGG TCAGAGGCAG AGGGTTGCCG TTGCCCGCGC GATCGTTCAC GAACCCGAAG TGCTCTTGAT GGACGAGCCT CTTTCTAATC TGGACGCGCT TTTGAGGGTG AAGATGAGAA GCGAGCTGAA AAAGCTCCAG GAAAGAATAG GAGTCACCAC CATCTATGTG ACTCATGACC AGACAGAGGC CATGACGATG GGAGACAGAA TCGCGGTGAT GAACCAGGGG AGAATCCAGC AGGTTGGTAC GCCCTCTGAG ATCTATCACC ACCCGGTGAA CATCTTCGTT GCTGGTTTTG TGGGGTCTCC GCAGATGAAC TTCTTAGAGA TGGAAGTGAG ATCGGAAGGA AATAGCGTTG TCCTCCAAAA CGGTGAGATA AAGATTCCCG CGAAGACCGA TCCAGGTGCA AAAAAGGTGA TCCTTGGTAT TCGACCGGAG AACGTCTATC TGGAGGAAAA GCCGAACACT TTGAAGCTGG AAGGAGAGGT TTATTTCGCC GAGAAACTCA TGTCGGATAC GATTCTCCAT CTCAACGTTG GAAGTGAGAA GATCGTCGCA AAAATTCCAG GGGATGTGGA TTTCAGAAGC GGTGAGAAGA TCACGTTTTT CCTGGACGTT GAAAAGATCC ATCTCTTTCA CCCTGAGACG GGAGAGAGAA TCTCATGA
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Protein sequence | MAQVRIDGVK KYFGNVKALD GIDLVVNEGE FLVLLGPSGC GKTTLLRCIA GLEQVTGGRI FFNDRDVTNL PPKDRNISMV FQSYAVWPHM KVYDNIAYPL KLKKVPKEEI EKRVKWAADL LHISELLDRY PAQLSGGQRQ RVAVARAIVH EPEVLLMDEP LSNLDALLRV KMRSELKKLQ ERIGVTTIYV THDQTEAMTM GDRIAVMNQG RIQQVGTPSE IYHHPVNIFV AGFVGSPQMN FLEMEVRSEG NSVVLQNGEI KIPAKTDPGA KKVILGIRPE NVYLEEKPNT LKLEGEVYFA EKLMSDTILH LNVGSEKIVA KIPGDVDFRS GEKITFFLDV EKIHLFHPET GERIS
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