| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1533 |
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| Symbol | |
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| ID | 5170785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1521058 |
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| End bp | 1522125 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640564060 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001245117 |
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| Protein GI | 148270657 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000125557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGTCT GCAGGATTTG TGGTCTTTCA CTTGATGAGA TCAGCGATTC GATAGGTGTC
TGCCTGGAGT GCCTGAGAAA GGGGAATCTG GATTTTGCAA GGAAGGCCCA CAGAAAATGG
AGGGAAGAGA TCGGTCTTCC CGTTGAAAGG TGGGCTCGTG AAGAAGGAAA GGTGTGTTTC
CTCTGCGTCA ATTCGTGCGT GATACCGGAA GGGAAAACAG GATTTTGCGG CGTTCTCAGA
AACGAAGGAG GCAGGCTCTC CTATATAACA GGCTCTCACA GGAAGGCCTT CCTTCACTGG
TACTACGATC CCCATCCAAC GAACTGCGTC GCACTACCTA TCTGTCCGGA AAGAGAACAC
AGGGGCTTTT ACAATTTCGC AGTCTTCTTC GCAGGATGCA ACCTCGACTG CCTCTTCTGT
CAGAACATAG ATCACAAGTA CATGGTGAAA GACGGAAGGA TATCCGAAGG AAAGATCGTG
GACATCGACG AACTCGTTGA GATAGCTATG AAACCACGCG TCTCCTGTGT GTGCTTTTTC
GGGGGAGATC CCACTCCCTG GACTGTGTTT GCACTGGAGT TTGCCGTGAA GCTGGGAAAT
CGCCGAAGGA TCTGCTGGGA AACGAATGGT CTTGCTCATC CCAGGATCAT GGAGAGGATG
GCCAGAGTCA GTCTTGAAAG TGGTGGCATA GTCAAGATAG ACTGGAAGGC CTTTTCACCG
GAGGTTTATG AAGCGCTGAC CGGAGTTGAC GGGAAGAGTG CCGTTAGAAG AATCATGGAG
AACGTGCAGC TGGTTTCCTC CATGGGTAAG GGAAGAGAAA TACCACTTCT TGTTATCAGT
GTTCTTGTAA TACCTCACTA CATCGACGAA AAGGAAATAG AAGGAATCGC AGGGTTCATT
TCATCGGTGG ATCCAGAAAT TCCCCTTGTT CTCCTTGCGT TCGCTCCTCA GCACCTGATG
AGCGATCTTC CAACCACCAG AAAACATCAC ATGGAGAGAG TGAAACAGAA GGCACTCGAA
AAGGGTCTGA AGAGGGTGTT CGTGGAGAAC GTTTGGCTTC TGAGCTAA
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| Protein sequence | MGVCRICGLS LDEISDSIGV CLECLRKGNL DFARKAHRKW REEIGLPVER WAREEGKVCF
LCVNSCVIPE GKTGFCGVLR NEGGRLSYIT GSHRKAFLHW YYDPHPTNCV ALPICPEREH
RGFYNFAVFF AGCNLDCLFC QNIDHKYMVK DGRISEGKIV DIDELVEIAM KPRVSCVCFF
GGDPTPWTVF ALEFAVKLGN RRRICWETNG LAHPRIMERM ARVSLESGGI VKIDWKAFSP
EVYEALTGVD GKSAVRRIME NVQLVSSMGK GREIPLLVIS VLVIPHYIDE KEIEGIAGFI
SSVDPEIPLV LLAFAPQHLM SDLPTTRKHH MERVKQKALE KGLKRVFVEN VWLLS
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