Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1533 |
Symbol | |
ID | 5170785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1521058 |
End bp | 1522125 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640564060 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001245117 |
Protein GI | 148270657 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000125557 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGAGTCT GCAGGATTTG TGGTCTTTCA CTTGATGAGA TCAGCGATTC GATAGGTGTC TGCCTGGAGT GCCTGAGAAA GGGGAATCTG GATTTTGCAA GGAAGGCCCA CAGAAAATGG AGGGAAGAGA TCGGTCTTCC CGTTGAAAGG TGGGCTCGTG AAGAAGGAAA GGTGTGTTTC CTCTGCGTCA ATTCGTGCGT GATACCGGAA GGGAAAACAG GATTTTGCGG CGTTCTCAGA AACGAAGGAG GCAGGCTCTC CTATATAACA GGCTCTCACA GGAAGGCCTT CCTTCACTGG TACTACGATC CCCATCCAAC GAACTGCGTC GCACTACCTA TCTGTCCGGA AAGAGAACAC AGGGGCTTTT ACAATTTCGC AGTCTTCTTC GCAGGATGCA ACCTCGACTG CCTCTTCTGT CAGAACATAG ATCACAAGTA CATGGTGAAA GACGGAAGGA TATCCGAAGG AAAGATCGTG GACATCGACG AACTCGTTGA GATAGCTATG AAACCACGCG TCTCCTGTGT GTGCTTTTTC GGGGGAGATC CCACTCCCTG GACTGTGTTT GCACTGGAGT TTGCCGTGAA GCTGGGAAAT CGCCGAAGGA TCTGCTGGGA AACGAATGGT CTTGCTCATC CCAGGATCAT GGAGAGGATG GCCAGAGTCA GTCTTGAAAG TGGTGGCATA GTCAAGATAG ACTGGAAGGC CTTTTCACCG GAGGTTTATG AAGCGCTGAC CGGAGTTGAC GGGAAGAGTG CCGTTAGAAG AATCATGGAG AACGTGCAGC TGGTTTCCTC CATGGGTAAG GGAAGAGAAA TACCACTTCT TGTTATCAGT GTTCTTGTAA TACCTCACTA CATCGACGAA AAGGAAATAG AAGGAATCGC AGGGTTCATT TCATCGGTGG ATCCAGAAAT TCCCCTTGTT CTCCTTGCGT TCGCTCCTCA GCACCTGATG AGCGATCTTC CAACCACCAG AAAACATCAC ATGGAGAGAG TGAAACAGAA GGCACTCGAA AAGGGTCTGA AGAGGGTGTT CGTGGAGAAC GTTTGGCTTC TGAGCTAA
|
Protein sequence | MGVCRICGLS LDEISDSIGV CLECLRKGNL DFARKAHRKW REEIGLPVER WAREEGKVCF LCVNSCVIPE GKTGFCGVLR NEGGRLSYIT GSHRKAFLHW YYDPHPTNCV ALPICPEREH RGFYNFAVFF AGCNLDCLFC QNIDHKYMVK DGRISEGKIV DIDELVEIAM KPRVSCVCFF GGDPTPWTVF ALEFAVKLGN RRRICWETNG LAHPRIMERM ARVSLESGGI VKIDWKAFSP EVYEALTGVD GKSAVRRIME NVQLVSSMGK GREIPLLVIS VLVIPHYIDE KEIEGIAGFI SSVDPEIPLV LLAFAPQHLM SDLPTTRKHH MERVKQKALE KGLKRVFVEN VWLLS
|
| |