| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1504 |
|---|
| Symbol | thiH |
|---|
| ID | 5170901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 1491720 |
|---|
| End bp | 1493141 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640564030 |
|---|
| Product | thiamine biosynthesis protein ThiH |
|---|
| Protein accession | YP_001245088 |
|---|
| Protein GI | 148270628 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
|---|
| TIGRFAM ID | [TIGR02351] thiazole biosynthesis protein ThiH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0434134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTATGT ATGTGTTTGT GAAAGAGCGT GTAGAGAGCA GATCTTTCAT ACCGGAAGAA
AAGATATTTG AACTTCTGGA GAAAACGAAA AACCCGGATC CTGCAAGGGT GAGAGAGATC
ATCCAGAAGT CGCTGGACAA GAACAGGCTC GAGCCGGAAG AGACGGCCAC CCTTTTGAAT
GTGGAAGATC CAGAGCTTCT GGAGGAGATC TTCGAAGCAG CCCGCACTCT GAAAGAACGA
ATCTACGGAA ACAGAATAGT TCTCTTCGCA CCGCTGTACA TAGGAAACGA TTGTGTCAAC
GACTGTGTTT ACTGTGGTTT CAGAGTTTCC AACAAAGTGG TGGAAAGAAG AACGCTCACG
GAAGAGCAAT TGAAAGAAGA AGTCAGGGCA CTCGTTTCCC AAGGGCACAA AAGACTCATC
GTCGTCTATG GAGAGCACCC CAAGTATTCA CCAGAGTTCA TCGCAAGGAC GATCGACATC
GTTTACAACA CAAAGTACGG AAACGGCGAG ATCAGGCGTG TGAACGTCAA CGCTGCTCCT
CAAACGATTG AAGGCTACAA GATCATAAAG TCCGTGGGAA TCGGAACCTT CCAGATCTTT
CAGGAAACGT ATCACAGGGA AACGTATTTG AAACTCCATC CAAGAGGTCC GAAATCGAAC
TACAACTGGA GGCTCTATGG ACTGGACAGA GCAATGATGG CGGGAATCGA CGACGTTGGA
ATAGGAGCGC TCTTCGGCCT CTACGACTGG AAGTTCGAAG TGATGGGTCT CCTTTACCAC
ACGATACACC TCGAAGAGAG ATTCGGTGTG GGACCACACA CCATCTCTTT CCCGAGGATA
AAACCCGCGA TAAACACACC ATATTCGCAG AAACCGGAAC ACATCGTGAG CGACGAAGAC
TTCAAGAAGC TCGTCGCCAT CATAAGGCTT TCTGTTCCGT ACACGGGCAT GATTCTCACC
GCAAGAGAAC CCGCAAAACT CAGGGACGAG GTGATAAAGC TCGGTGTTTC ACAGATAGAC
GCCGGCTCCA GAATAGGAAT CGGAGCGTAC TCTCACAGAG AAGACGACGA GGACAGAAAG
AGACAGTTCA CGCTCGAAGA CCCAAGACCA CTCGATCAGG TGATGAGAAG CCTACTGAAA
GAGGGCTTTG TACCTTCATT CTGCACCGCG TGTTACAGGG CAGGAAGAAC TGGGGAACAC
TTCATGGAAT TTGCAATTCC CGGTTTCGTG AAGAACTTCT GCACACCGAA CGCCCTGTTC
ACACTTCAGG AATACCTCTG TGACTACGCA ACAGAAGAAA CAAGGAAGGT AGGAGAGGAG
GTTATTGAAA GAGAACTTCA GAAGATGAAT CCAAAGATCA GAGAGAGAGT TAGAGAGGGA
CTCGAAAAGA TAAAGCGCGG TGAGAGGGAT GTTAGATTTT AA
|
|---|
| Protein sequence | MCMYVFVKER VESRSFIPEE KIFELLEKTK NPDPARVREI IQKSLDKNRL EPEETATLLN
VEDPELLEEI FEAARTLKER IYGNRIVLFA PLYIGNDCVN DCVYCGFRVS NKVVERRTLT
EEQLKEEVRA LVSQGHKRLI VVYGEHPKYS PEFIARTIDI VYNTKYGNGE IRRVNVNAAP
QTIEGYKIIK SVGIGTFQIF QETYHRETYL KLHPRGPKSN YNWRLYGLDR AMMAGIDDVG
IGALFGLYDW KFEVMGLLYH TIHLEERFGV GPHTISFPRI KPAINTPYSQ KPEHIVSDED
FKKLVAIIRL SVPYTGMILT AREPAKLRDE VIKLGVSQID AGSRIGIGAY SHREDDEDRK
RQFTLEDPRP LDQVMRSLLK EGFVPSFCTA CYRAGRTGEH FMEFAIPGFV KNFCTPNALF
TLQEYLCDYA TEETRKVGEE VIERELQKMN PKIRERVREG LEKIKRGERD VRF
|
|---|
| |