Gene Tpet_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1500 
Symbol 
ID5169997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1488685 
End bp1489206 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content41% 
IMG OID640564026 
Producthypothetical protein 
Protein accessionYP_001245084 
Protein GI148270624 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000125057 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAGAA GAGCGGGTTT CACGTTGATT GAGCTTCTGA TCGTCATGGC TATCATCGCG 
GCTCTGATGG CGGTGCTCAT TCCATCAGTA ACAGGGGCAA TGAGAAAAGC AACTGCCACA
AAGATAGCGG TGCAACTGAG AAACATAGAG CAAGCGGTGG AACAATATCT GTATTCTATG
TTGCCAAAGT CTGATGATTT AGACCAGTCA CCATATAATG ATCTTGATAG AAATCAGGAT
TTCAGAGATT TTACAAATGT TGGGCTTCTA AACAACGACG AAGTTGATAT TAAACTAATA
CCTGATGATA ATAATAAAAG GATAAAAATT GCCCTCTATT ACAATGCTCC TAGTACCGTC
ATAGCACAGC TGATAGTAGG TACTCTCAGA GAAGCGTACG GTGGTGGAAC GACGAAAAAT
CTTGGCTCGC TAGATGATGT TGATGAAAAT ACTGACGATG GAGCTTACTA CAATAACACC
AATGTTTTTA TCATCAAATC CATCGACGCC TTCTGGTGGT AA
 
Protein sequence
MRRRAGFTLI ELLIVMAIIA ALMAVLIPSV TGAMRKATAT KIAVQLRNIE QAVEQYLYSM 
LPKSDDLDQS PYNDLDRNQD FRDFTNVGLL NNDEVDIKLI PDDNNKRIKI ALYYNAPSTV
IAQLIVGTLR EAYGGGTTKN LGSLDDVDEN TDDGAYYNNT NVFIIKSIDA FWW