| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1498 |
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| Symbol | gatB |
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| ID | 5171133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1485606 |
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| End bp | 1487054 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640564024 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_001245082 |
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| Protein GI | 148270622 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0232445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATACA GACCCGTCAT AGGTCTTGAG ATACACGTTC AACTTTCAAC GAAGACCAAA
GCGTTCTGCT CTTGCCCAGC GGATGTCTTC GAGCTTCCCC CGAACACGGC GATCTGTCCC
GTCTGCACCG GCCAGCCGGG AGCCCTTCCT GTTCCCAACG AAGAGATGAT CAGGTTTGCC
GTGAAGACCG CCCTCGCATT GAACTGCAAG ATTCACAAGT ACTCCAGATT CGACAGAAAG
AACTACTTCT ATCCTGACCT TCCCAAGGGG TACCAGATCA GTCAGTACTT CTACCCGATC
GCAACCGAGG GTTTCCTGGA GATAGACGGA GACGAAGGAA GGAAAAAAGT CAGAATCAGA
AGACTCCACC TCGAGGAAGA CGCTGGGAAA CTCGTTCACG AAGGGGACTC CATCACCCGC
GCAAGCTACT CTCTGGTCGA TATGAACAGA TGCGGTGTTC CCCTAATTGA GATCGTTACA
GAGCCCGATA TTTCTTCCCC AAGAGAGGCT CGTGTTTTCA TGGAGAAGTT GAGATCCATC
GTGAGGTACC TCGGCGTGAG CACAGGAGAC ATGGAAAAGG GAGCGCTCAG ATGCGATGCG
AACATCTCCG TCGTTGACAC AGAAACGGGA AGACAGAGCA ACAGAGTGGA AGTGAAGAAC
ATGAACTCCT TCAGGTTCGT CGAGAAGGCT TTAGAGTACG AGTTCGAGCG AATCGTGAAG
GCGATGGAGA GAGGAGAAGA CGTGGAAAGA GAGACGAGAG GCTGGGACAT GACCACGAAG
ACCACCGTTT CCATGAGAGG AAAAGAAGAA GAAAGCGACT ACAGGTACTT CCCGGAACCG
GACATACCGC CCGTTGTTCT CTCTGACGAG TATCTCGAAG AGGTGAAAAA GGAACTCCCA
GAACTTCCAG ACGAGAAGGC GAAGCGCTTC ATGAGAGAGT ACGATCTTCC GGAGTACGAC
GCAAAGGTGC TCACCTCGAG TAAAGAACTC GCCGAGTTCT TCGAAGAGTG TGTGAAGGTG
GTGAACAGGC CGAAGGATCT CAGCAACTGG ATCATGACGG AAGTTTTGAG AGAACTCAAC
GAAAGAAACA TCGAAATCAC AGAGTCAAAA CTGACCCCTC AGCACTTCGC TGATCTCTTC
AAATTGATGG ACGAAGGAAA GATCTCCATA AAGATCGCAA AGGAGATATT CCCTGAGGTC
TTCGAAACAG GAAAGATGCC CTCCCAGATC GTGGAGGAAA AAGGTTTAGT TCAGATCAGC
GACGAAAAAC TCATCGAGGA ACTGGTGAAA AAGGCAATGG AACAGAACCC AAAGGCCGTT
CAGGATTACA AATCAGGCAA AAAGAAAGCG GCAGGGTTTT TCGTGGGATA CGTGATGAGA
GAGACAAAAG GAAAAGCGAA CCCGGAACTC ACGAACAGGA TCATTCAAAA ACTCCTCGAG
GGGGAGTGA
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| Protein sequence | MRYRPVIGLE IHVQLSTKTK AFCSCPADVF ELPPNTAICP VCTGQPGALP VPNEEMIRFA
VKTALALNCK IHKYSRFDRK NYFYPDLPKG YQISQYFYPI ATEGFLEIDG DEGRKKVRIR
RLHLEEDAGK LVHEGDSITR ASYSLVDMNR CGVPLIEIVT EPDISSPREA RVFMEKLRSI
VRYLGVSTGD MEKGALRCDA NISVVDTETG RQSNRVEVKN MNSFRFVEKA LEYEFERIVK
AMERGEDVER ETRGWDMTTK TTVSMRGKEE ESDYRYFPEP DIPPVVLSDE YLEEVKKELP
ELPDEKAKRF MREYDLPEYD AKVLTSSKEL AEFFEECVKV VNRPKDLSNW IMTEVLRELN
ERNIEITESK LTPQHFADLF KLMDEGKISI KIAKEIFPEV FETGKMPSQI VEEKGLVQIS
DEKLIEELVK KAMEQNPKAV QDYKSGKKKA AGFFVGYVMR ETKGKANPEL TNRIIQKLLE
GE
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