Gene Tpet_1495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1495 
Symbol 
ID5171307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp1483374 
End bp1484477 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content50% 
IMG OID640564021 
ProductABC transporter related 
Protein accessionYP_001245079 
Protein GI148270619 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.407646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAGG TTGTCCTTGA AAACGTCACC AAGGTCTACG AAAACAAAGT CGTCGCTGTG 
AAAAACGCGA ATCTCGTCGT CGAAGACAAG GAGTTCGTGG TTCTCCTTGG ACCATCCGGT 
TGTGGAAAAA CGACCACTCT GAGAATGATC GCAGGACTGG AGGAGATCAC AGATGGAAAG 
ATCTACATCG ACGGCAAAGT TGTGAACGAC GTCGAACCAA AAGACAGGGA CATCGCCATG 
GTGTTCCAGA ACTACGCTCT GTATCCACAC ATGACCGTCT ACGAAAACAT GGCCTTCGGC 
TTGAAGCTGA GAAAATATCC AAAGGACGAA ATCGACAGAA GAGTACGTGA AGCTGCGAAG 
ATTCTCGGAA TAGAAAACCT GCTCGACAGA AAACCGAGAC AGCTCTCAGG TGGTCAGAGG 
CAGAGGGTTG CCGTTGGAAG AGCCATCGTG AGAAATCCGA AGGTTTTCCT CTTCGACGAA 
CCGCTCTCCA ACCTCGACGC GAAACTCAGG GTACAGATGA GAAGCGAACT CAAGAAGCTC 
CACCACAGAC TCCAGGCAAC GATCATCTAC GTGACACACG ACCAGGTGGA AGCGATGACG 
ATGGCTGACA AGATCGTCGT CATGAAGGAC GGAGAGATTC AGCAGATAGG AACCCCACAC 
GAAATATACA ACTCTCCAGC GAACGTCTTC GTTGCCGGAT TCATCGGTAG TCCTCCAATG 
AACTTCATCA ACGCGAGAGT CGTGAGAGGA GAAGGCGGTC TCTGGATCCA GGCATCTGGC 
TTCAAAGTGA AGGTGCCGAA GGAATTCGAA GACAAACTCG CAAACTACAT CGACAAGGAG 
ATCATCTTCG GTATCAGACC TGAAGACATC TACGACAAGC TCTTCGCACT GGCACCAACT 
CCAGAGAACA CGATCACAGG TGTTGTGGAT GTGGTCGAAC CTCTCGGAAG TGAAACTATT 
CTCCACGTGA AAGTCGGAGA TGACTTGATT GTGGCATCCG TCAACCCGAG GACTCAGGCA 
AAAGAAGAAC AGAAAATCGA TCTGGTACTC GACATGACGA GAATGCACGC CTTCGATAAA 
GAAACGGAGA AGGCTATTAT CTGA
 
Protein sequence
MAQVVLENVT KVYENKVVAV KNANLVVEDK EFVVLLGPSG CGKTTTLRMI AGLEEITDGK 
IYIDGKVVND VEPKDRDIAM VFQNYALYPH MTVYENMAFG LKLRKYPKDE IDRRVREAAK 
ILGIENLLDR KPRQLSGGQR QRVAVGRAIV RNPKVFLFDE PLSNLDAKLR VQMRSELKKL 
HHRLQATIIY VTHDQVEAMT MADKIVVMKD GEIQQIGTPH EIYNSPANVF VAGFIGSPPM 
NFINARVVRG EGGLWIQASG FKVKVPKEFE DKLANYIDKE IIFGIRPEDI YDKLFALAPT 
PENTITGVVD VVEPLGSETI LHVKVGDDLI VASVNPRTQA KEEQKIDLVL DMTRMHAFDK 
ETEKAII