| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1489 |
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| Symbol | |
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| ID | 5171648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1474148 |
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| End bp | 1476355 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640564015 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_001245073 |
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| Protein GI | 148270613 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00335848 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGGTGT ACGCGTTCGG CTTTCCAAAG ATAGGTGAGA AAAGAGAGTT CAAGAAAGCA
CTGGAAGATT TCTGGAAGGG GAAGATCACA GAAAACCAGT TCAAAGAAGA GATGAGCGAA
CTCAGGATGT ACATGGTGGA GAACTACAGA ACGAACGTGG ACGTTGTTCC TTCGAACGAA
CTTTCCTACT ACGATTTCGT TCTCGACACA GCCATAATGG TGGGGGCAAT TCCGGAGCGG
TTTGGAAAGT ATGAGGGCCT TTCGACTTAT TTTGAGATGG CACGTGGAAG AAAAGCCCTT
GAGATGACAA AGTACTTCAA CACGAACTAC CACTACCTTG TTCCCGAGAT AGAGAGTGGA
AACTTTGAAC TCCTTGAAAA TATACCTCTT GAAGATTTTC TCTTTTTCAG GTCGATGGGA
ATTGAAACCG CACCAAGAAT ACTGGGACCG TTCACCTTCC TCTATCTTTC CAAAAAAGAC
GGGATGTGGA TCAGAGAACC CGGTGAAATG GAAAAACTTT TCACCAGGCT CGTTCCTGTT
TACAGGAAAG TTTTTGAAGA ACTCGTAGAA AACGGTTGTG GAGAAATCCT CGTGGACGAG
CCTGCCTTCG TGTGTGATCT TCAGAAAGAC CACTGGAATT TGATAAAAGA TGTGTACAGC
GAGTTTTCAG GGTTTCCTTT GACGATTTTT ACCTATTACG ATAGCGTCTC TGACTACGAG
TCTTATGTGT CCCTTCCTGT GAAGGGCCTT CACCTGGATT TTGTTTCAAA CACAGAAAAT
CTCAGAAACT TCGAAAAACA CGGTTTTCCA TCGGACAAGA CTCTCATAGC CGGTGTCATA
AACGGCCGTC AGCCCTGGAG AGCAAATCTC AAGAAAGTGG CAGAACTTGT GGACAAACTC
GGTGCGAGTG CCATCTCGAA CTCCTGTCCG CTATTTCACC TTCCCATAAC TGCGCAATGG
GAAAACAGCC TTCCTGATGG TCTGAGGGAA AAACTTGCCT TCGCAAAGGA AAAACTTGAA
GAGCTGAAAG TACTGAAAGA GTTCTTTGAA GGGAAAAAAG TAAATCTTCC AGAGGTTAGT
TTCGAAGACT TCGCCGTCGA TGAATCAGTT TCTAAAAAGA TAAAACAGCT CACACCTGAC
TCTTTCAGAA GAGAGAAGGA GTATCAGGAG CGTGACAGGA TTCAAAGAGA AGAACTGAAA
CTTCCTCTTT TTCCGACCAC AACAATCGGA TCTTTCCCTC AGACCAGCGA TGTGAGAAAG
ATGAGGGCAA GGTACAGAAG GGGAGAAATC TCGGAAGAAG AATACGAGTC CTTCATAAAA
GAACAGATAA AAAAGGTAGT AAGGATCCAG GAAGAGATAG GGCTCGATGT TCTGGTGCAC
GGTGAGTTCG AAAGAACCGA CATGGTCGAG TTCTTCGCTG AGAAATTGAA CGGCATCGCC
ACCACTCAGA ACGGTTGGGT TCTCTCTTAC GGTTCGAGGT GTTATCGTCC ACCCATCATA
TACGGCACGG TTTCAAGGAC AGGGCCCATG ACGTTGAAAG AAATCACCTA CGCACAGTCT
CTGACAGAAA AACCCGTCAA GGGAATGCTC ACAGGTCCCA TCACCATCAT GGGCTGGAGC
TACTACAGGG AAGACATACC AGAGAGAGAA ATAGCTTACC AGATAGCCCT CGCGATAAAC
GAAGAAGTGA AGGATCTGGA AGAGGCGGGA ATAAAGATCG TACAGATCGA TGAGCCCGCG
TTCAGAGAAA AGGCACCTGT CAAAAAGAGC AAATGGCCTG AGTACTTTGA ATGGGCGATA
AACGCTTTCA ACCTGGCAGC CAACGCGAGG CCAGAAACAC AGATCCACGC CCACATGTGC
TACTCGGATT TCAACGAGAT AATCGAGTAC ATCCACCAGC TGGAATTCGA CGTGATCAGC
ATTGAGGCTT CGAGGAGCAA AGGTGAGATC ATCTCTGCCT TTGAGAACTT CAAAGGATGG
ATCAAACAGA TCGGTGTTGG TGTCTGGGAC ATCCACTCTC CCGCTGTTCC CTCCGTTGAT
GAAATGAAGA GTATAATAGA AAGAGTCCTC AGGATACTTC CGAAGGAACT GATATGGGTG
AACCCCGACT GTGGCCTTAA AACAAGAAAC TGGGAAGAGG TCGTACCCTC TTTGAAAAAC
ATGGTGGACC TTGCAAAGAA GTTGAGGAAG GAGTATAATA ACACTTGA
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| Protein sequence | MKVYAFGFPK IGEKREFKKA LEDFWKGKIT ENQFKEEMSE LRMYMVENYR TNVDVVPSNE
LSYYDFVLDT AIMVGAIPER FGKYEGLSTY FEMARGRKAL EMTKYFNTNY HYLVPEIESG
NFELLENIPL EDFLFFRSMG IETAPRILGP FTFLYLSKKD GMWIREPGEM EKLFTRLVPV
YRKVFEELVE NGCGEILVDE PAFVCDLQKD HWNLIKDVYS EFSGFPLTIF TYYDSVSDYE
SYVSLPVKGL HLDFVSNTEN LRNFEKHGFP SDKTLIAGVI NGRQPWRANL KKVAELVDKL
GASAISNSCP LFHLPITAQW ENSLPDGLRE KLAFAKEKLE ELKVLKEFFE GKKVNLPEVS
FEDFAVDESV SKKIKQLTPD SFRREKEYQE RDRIQREELK LPLFPTTTIG SFPQTSDVRK
MRARYRRGEI SEEEYESFIK EQIKKVVRIQ EEIGLDVLVH GEFERTDMVE FFAEKLNGIA
TTQNGWVLSY GSRCYRPPII YGTVSRTGPM TLKEITYAQS LTEKPVKGML TGPITIMGWS
YYREDIPERE IAYQIALAIN EEVKDLEEAG IKIVQIDEPA FREKAPVKKS KWPEYFEWAI
NAFNLAANAR PETQIHAHMC YSDFNEIIEY IHQLEFDVIS IEASRSKGEI ISAFENFKGW
IKQIGVGVWD IHSPAVPSVD EMKSIIERVL RILPKELIWV NPDCGLKTRN WEEVVPSLKN
MVDLAKKLRK EYNNT
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